Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0125 AAAATAATCCCTGATTCTAGGTTTAAAAATGTGTCACGCTTATTCTCCACCGCCACGCCACTCCACTTGTGTTTCTCTGGTGGTGCTGTTCCTTCTGATTCCGAAGCGACACTCAGCCCCTTCTCTCAGATTCAAACTCTTTTCAGAATGGGAGCTGGGCGTGAAGTCTCAATCTCACTCGACGGAGTGAGGGACAAGAACCTAATGCAGCTCAAGAAGCTCAACATAGCTCTTTTCCCTGTTCGTTACAATGAAAAATACTATGCCGATGCACTTGCTTCCGGTGAATTCACTAAACTAGCATACTACAGTGACATATGTGTTGGTGCAATTGCATGCCGGCTTGAGAAGAAGGAAAATGGGGGACAAATCCGGGTTTACATTATGACTTTAGGTGTTTTGGCACCTTACCGTGGGCTTGGTATTGGTAAGGAAGAATTTCAATGTCTTTCCCTTGTGCTAACTGGAGGTTTATTTGATCATTTTCATTATAATTTCTGTAATTGGTTTTATGCAGGAACAAAGCTCTTGAATCATGTACTTGATCTTTGCTCCAAGCAAAACATTTCTGAGGTTTACTTGCATGTGCAGACAAATAATGAAGATGCCATAAACTTTTATAAGAAATTTGGGTTTGAAATCACAGAAACAATCCAGAACTATTATACAAACATCTCACCACCAGACTGCTATGTTCTTACAAGGCATACAGTTCAGAGCCCAACAAAGAAATAG 735 0.4095 KIIPDSRFKNVSRLFSTATPLHLCFSGGAVPSDSEATLSPFSQIQTLFRMGAGREVSISLDGVRDKNLMQLKKLNIALFPVRYNEKYYADALASGEFTKLAYYSDICVGAIACRLEKKENGGQIRVYIMTLGVLAPYRGLGIGKEEFQCLSLVLTGGLFDHFHYNFCNWFYAGTKLLNHVLDLCSKQNISEVYLHVQTNNEDAINFYKKFGFEITETIQNYYTNISPPDCYVLTRHTVQSPTKK* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0125 244 PANTHER SUMO-CONJUGATING ENZYME SCE1 172 239 - -
Amo07g0125 244 PANTHER SUMO-CONJUGATING ENZYME SCE1 50 145 - -
Amo07g0125 244 Gene3D - 172 237 - -
Amo07g0125 244 Gene3D - 54 150 - -
Amo07g0125 244 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 58 239 IPR000182 GO:0016407
Amo07g0125 244 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 173 234 IPR016181 -
Amo07g0125 244 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 62 145 IPR016181 -
Amo07g0125 244 PANTHER N-ALPHA-ACETYLTRANSFERASE 172 239 - -
Amo07g0125 244 PANTHER N-ALPHA-ACETYLTRANSFERASE 50 145 - -
Amo07g0125 244 CDD NAT_SF 100 195 - -
Amo07g0125 244 Pfam Acetyltransferase (GNAT) family 172 212 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0125 Amo-Chr7 1231609 1233273 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo07g0125 Acetyltransf_1 1.1e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0125 K20793 - gmx:100499961 303.908