Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0111 ATGGCTGGCAAGCAAATTGTTTCCTCTGACCCCCTGAGCTGGGGCCTAGCAGCGGATTCACTCAAGGGCAGCCACTTTCATGAGGTCAAACGCATGGTGGCCGAGTACCGGAAGTCCGCCCTTTGCATGGGAGCGGGGGAGCCCCTAACCGTGTCGCAGGTGGCTGCCGTTGCCAAGCGTGAGTCTCAAGTCAAGGTGGAGCTCGCTGAGTCTGCGAGGGCAGGCGTCGAGGCCAGCTGCCAGTGGATCATGGACAGCGTTGAAAAAGGCATTACCATCTATGGTGTTACCACTGGCTTTGGCGCTGCCTCCAACAGAAAAACCGATCAGGGACTTGCCCTTCAGAGAGAGATGGTTAGGTTTTTGAATTGTGCAATATTTGGCCATGAAAGTGAGTTATCTCATACCCTGCCAAAATCAGCAACGAGAGCAGCAATGCTTGTGAGGGTCAACACCCTTCTTCAGGGGTACTCTGGCATCAGATTTGAAATCTTAGAAGCTATCACCAAACTCCTCAACAACAATGTCACCCCCGTATTGCCATTACGCGGTACCATTACTGCTTCTGGCGATCTGATTCCTCTCTCCTACATTGCTGCATTGCTAACTGGCCGGCAAAACTCCAAAGCCCTCGGACCCTCTGGAGAGTCCCTTGATGCAAACGAAGCTTTCCATTTAGCAGGMCTGCATTCTGGGTTCTTTGAGCTGAAACCCAAAGAAGGACTTGCCCTCGTAAATGGCACRGCCGTGGGGTCTAGTGTAGCTTCTGTGGTGCTCTTTGAGGCAAACATCTTAGCTTTATTGTCTGAAATTTTGTCAGCAGTTTTCACCGAAGTTATGCAGGGGAATCCAGAATTTACACATCATRTGATACATAAGCTGAAGTACCATCCTGGCCAAATTGAAGCTGCTGCTATTATGGAGCACATCTTAGAGGGTAGCTCTTACATCAAACAAGCCAGAATGCYACAGCCAGATCCATTGCAGAAYCCTAAAAAAGATCGTTATGCTCTCCAAACTTCTCCTCAGTGGCTTGGTCCACAGATTGAAGTCATCAGGTATTCGACTAAATCAATTGAGAGGGAAATAAACTCTGTCAACGACAATCCTTTGATTGATGTCACTAGTAGCAAGGCTTTGAATGGTGGCAATTTTCAAGGCACCCCAATTGGAGTTTCGATGGATAATGCACGRTTAGCTGTTGCTTCKATTGGCAAACTCATCTTTGCCCAATTTACCGAGCTAGTCAATGACTCGTATAACAACGGTTTGCCATCGAATCTCTCTGTCGGCAGAAATCCGAGTCTGGATTATGGTTTTAAGGCATCTGAGGTTGCCATGGCTGCTTATTGCTCTGAACTTCAATATCTGGCAAACCCAGTAACCAACCACGTACAAAGTGCTGAGCAACATAACCAAGATGTGAATTCCTTGGGGTTAATTTCCGCTTGGAAAACCGTAGAAGCTGTGGAGATATTGAAGCTAATGTGCTCCACGTATTTGGTTGCGCTTTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAATTTTGAAGAGCACAATCAAGGATACTATAAGCGGAGTTGCAAAGAAGACATTAAGCACGAATTTGTTTGGATCATGTGAGACAGATTTGCTCAAAGTAGTTGATAGAGAATATGTATTCTCCTATATTGATGACCCCTTCAATGTTAGATATCCATTGATGCCAAAATTGAAACAAATACTTTATGAGGAAGCACAAGCGAGTGCCATCAGCGGGAAGAAAAATGCGAGCGTAGTTTTTGAGGAAATTGGAGCTTTTGAGAATGCGTTGAAGAGTATGTTACCAAATGAGGTTGAAAGTGCAAGGGTGGCTTATGAGAATGGGAATCCAACAGTTCCAAATAGAATTGCAGAAAGCAGATCATACCCATTGTATAAGTTTGTGAGGGAGGAGCTCGGAATAGGGTTGCTCACCGGCGAGAAGACTGCCTCACCAGACAAAGAATTCGAGAAAGTATTTACAGCAATTTGTCAAGGAAAGATTTTGGACTCCATTCTAGACTGTCTCAAAGAATGGAACGGGGTTCCCGTTTCAGTTTTCTAG 2088 0.4574 MAGKQIVSSDPLSWGLAADSLKGSHFHEVKRMVAEYRKSALCMGAGEPLTVSQVAAVAKRESQVKVELAESARAGVEASCQWIMDSVEKGITIYGVTTGFGAASNRKTDQGLALQREMVRFLNCAIFGHESELSHTLPKSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNNNVTPVLPLRGTITASGDLIPLSYIAALLTGRQNSKALGPSGESLDANEAFHLAGLHSGFFELKPKEGLALVNGTAVGSSVASVVLFEANILALLSEILSAVFTEVMQGNPEFTHHXIHKLKYHPGQIEAAAIMEHILEGSSYIKQARMXQPDPLQNPKKDRYALQTSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVTSSKALNGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELVNDSYNNGLPSNLSVGRNPSLDYGFKASEVAMAAYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISAWKTVEAVEILKLMCSTYLVALCQAIDLRHLEEILKSTIKDTISGVAKKTLSTNLFGSCETDLLKVVDREYVFSYIDDPFNVRYPLMPKLKQILYEEAQASAISGKKNASVVFEEIGAFENALKSMLPNEVESARVAYENGNPTVPNRIAESRSYPLYKFVREELGIGLLTGEKTASPDKEFEKVFTAICQGKILDSILDCLKEWNGVPVSVF* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0111 695 Gene3D - 514 629 IPR023144 -
Amo07g0111 695 PANTHER PHENYLALANINE AMMONIA-LYASE 5 693 - -
Amo07g0111 695 Pfam Aromatic amino acid lyase 49 513 IPR001106 -
Amo07g0111 695 Gene3D - 2 248 IPR024083 -
Amo07g0111 695 PANTHER HISTIDINE AMMONIA-LYASE 5 693 IPR001106 -
Amo07g0111 695 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 10 685 IPR005922 GO:0005737|GO:0006559|GO:0016841
Amo07g0111 695 CDD PAL-HAL 47 511 IPR001106 -
Amo07g0111 695 Gene3D Fumarase/aspartase (Central domain) 249 689 - -
Amo07g0111 695 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 184 200 IPR022313 GO:0016841
Amo07g0111 695 SUPERFAMILY L-aspartase-like 10 693 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0111 Amo-Chr7 1143392 1145569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0111 6 694 Monolignol Biosynthesis Gene Families AT2G37040 69.253 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0111 K10775 - gmx:100787872 1104.74