Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0091 ATGAAAGATGGGAAGATTACTCAATGTGGAAAGTATAATGACTTGCTTAACAGTGGGAATGATTTCATGGAACTTGTTGGTGCACACAAGAAAGCGTTGTCTACACTCGAGTCTTTGGATGGAGGAACAACATCAGATGAAATAAGCACCATGGAAGATGGAAGTGTTTCTAGTGCTAATGGAAGTATTAAAGTAAAAGAGGTAAACGGATACGAGCAAAATGGTAAAACAGATGAGAAAGATGAGCCAAAAGGGCAGCTTGTTCAGGAAGAAGAAAGGGAGAAAGGTAGAGTTGGACTTTCAGTCTATTGGAGATACATCACGATGGCGTATGGAGGAGCTCTCGTTCCTTTCATATTGTTGTCTCAGATTCTCTTCCAAGTTCTCCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCAGTCTCACAAGATGTGGAGCCACCTGTTGAAGGAACAACTCTTTTGGCTGTCTATGTTGCTTTGGCCATTGGAAGTGCATTTTGCATCCTTTCTAGAGCAATGTTTCTTGCCACGGCTGGTTATAAGACGGCTACTATACTTTTCAATAAAATGCATTTCTGCATCTTCCGTTCCCCAATGTCATTCTTTGATTCCACTCCGAGTGGTCGAATCCTTAACAGAGCTTCTACTGACCAAAGTGCAGTAGATACTGATATTCCTTATCAAATTGGTTCGTTCGCCTTCTCCATGATCCAGCTTGTAGGAATTATAGCAGTGATGTCCCAAGTTGCATGGCAAGTTTTCATTGTCTTTATACCTATGATAGCAGCCAGCATATGGTATCAGCAATACTATATACCATCGGCTCGAGAACTATCACGTTTAGTTGGAGTATGCAAAGCTCCAATCATTCAACACTTTGCTGAAACAATTTCTGGTACATCAACCATTAGAAGCTTTGATCAGCAGTCTAGATTTCAGGAAACAAATATGAAATTGACCGATGGCTACTCTCGGCCAAAGTTTAATATTGCTGGTGCTATGGAGTGGTTGTGCTTCCGATTAGATATGTTGTCCTCTATCACATTTGCCTTTTCCTTGATATTCTTGATATCTATTCCTCAAGGAGTCATAGATCCAGGCATTGCCGGTTTAGCTGTTACGTATGGTCTTAATTTAAACATGATACAAGCTTGGGTGATATGGAATCTTTGTAACTTGGAGAACAAGATTATATCAGTAGAAAGAATACTTCAGTACACTTCCATTCCTAGTGAGCCTCCCCTTGTTATAGAAGAAAATCGACCAGCTCCTTCTTGGCCATCATATGGAGAGGTTGATATACATAACTTGCAGGTTCGTTATGCTCCGCACCTTCCACTTGTGTTGCGTGGCCTCACATGCACATTTCACGGAGGACTGAAAACTGGGATTGTTGGGAGAACAGGAAGTCGTAAATCAACTCTCATACAAACACTCTTCCGAATTGTTGAACCAACCACAGGAGAAGTTATGATTGACGGCATCAACATCTCTTCGATAGGACTTCATGATTTGAGGTCTAGACTAAGCATTATTCCTCAAGATCCAACCATGTTTGAAGGGACAGTCAGAAATAATCTTGATCCTCTAGAAGAGTACACAGATGAACAAATATGGGAGGCCCTGGACAAGTGTCAGCTTGGTGATGAAGTTAGACAAAAAGAAGGAAAGTTGGACTCGTCGGTTAGCGAGAATGGCGAAAATTGGAGTATGGGTCAGAGGCAATTGGTGTGCTTAGGTAGGGTGTTGCTTAAGAAGAGCAAGGTATTGGTGCTCGATGAAGCGACTGCATCAGTTGATACTGCTACAGACAATTTGATACAACAAACTCTTAGGCTACATTTCGTCGACTCAACAGTCATAACCATTGCACATAGAATCACTTCTGGTCTTGACAGTGATATGGTCTTGCTTCTTCATCAAGGATTAATTGAGGAATATGATTCACCTTCAAAATTGCTAGAGGATAGATCATCATCTTTTGCTCAACTTGTTGCAGAGTATACAATGAGGTCTAAATCCACTTTTGAGAAATCTGCTGATCACTGA 2058 0.4121 MKDGKITQCGKYNDLLNSGNDFMELVGAHKKALSTLESLDGGTTSDEISTMEDGSVSSANGSIKVKEVNGYEQNGKTDEKDEPKGQLVQEEEREKGRVGLSVYWRYITMAYGGALVPFILLSQILFQVLQIGSNYWMAWATPVSQDVEPPVEGTTLLAVYVALAIGSAFCILSRAMFLATAGYKTATILFNKMHFCIFRSPMSFFDSTPSGRILNRASTDQSAVDTDIPYQIGSFAFSMIQLVGIIAVMSQVAWQVFIVFIPMIAASIWYQQYYIPSARELSRLVGVCKAPIIQHFAETISGTSTIRSFDQQSRFQETNMKLTDGYSRPKFNIAGAMEWLCFRLDMLSSITFAFSLIFLISIPQGVIDPGIAGLAVTYGLNLNMIQAWVIWNLCNLENKIISVERILQYTSIPSEPPLVIEENRPAPSWPSYGEVDIHNLQVRYAPHLPLVLRGLTCTFHGGLKTGIVGRTGSRKSTLIQTLFRIVEPTTGEVMIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRQKEGKLDSSVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRLHFVDSTVITIAHRITSGLDSDMVLLLHQGLIEEYDSPSKLLEDRSSSFAQLVAEYTMRSKSTFEKSADH* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0091 685 CDD ABCC_MRP_domain2 433 653 - -
Amo07g0091 685 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 681 - -
Amo07g0091 685 SUPERFAMILY ABC transporter transmembrane region 116 417 IPR036640 GO:0005524|GO:0016021
Amo07g0091 685 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 118 398 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo07g0091 685 MobiDBLite consensus disorder prediction 67 92 - -
Amo07g0091 685 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 681 - -
Amo07g0091 685 MobiDBLite consensus disorder prediction 71 92 - -
Amo07g0091 685 SMART AAA_5 461 646 IPR003593 -
Amo07g0091 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 425 666 IPR027417 -
Amo07g0091 685 Gene3D ABC transporter type 1, transmembrane domain 78 416 IPR036640 GO:0005524|GO:0016021
Amo07g0091 685 Pfam ABC transporter transmembrane region 118 361 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo07g0091 685 Pfam ABC transporter 453 600 IPR003439 GO:0005524
Amo07g0091 685 Gene3D - 418 671 IPR027417 -
Amo07g0091 685 Coils Coil 685 685 - -
Amo07g0091 685 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 437 669 IPR003439 GO:0005524
Amo07g0091 685 CDD ABC_6TM_ABCC_D2 116 410 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0091 Amo-Chr7 1041759 1044511 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0091 433 668 Calmodulin-binding Proteins AT2G36910 27.917 1.29e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0091 - K05666 gmx:100777836 1175.61