Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0072 ATGAGAGGTTTAATAGCAAGGCACCTTCACCTGTTGCCGTTCAATCGGAGGATCACCACTAACATCACCACCATCACCATGTCGGCATCATCATCTGCTCTCAGCACACCCAGATTGGTCCTCAAGAAGGTTCTGGCCAAGTCTCAACGCGAAGGCGATGGGGCTGTTGTCAGAAGAGGCATTGGAAGAAGCGAGTTGAAGAACTTGGATCCATTTTTGATGTTGGATCACTTCTCAGTATCCCCCCCTGGAGGATTCCCTGATCATCCCCACAGAGGTTTTGAGACCGTTACCTACGTCCTAGAGGGGGGCATAACTCACCAAGATTTTGCAGGGCACCAGGGCACAATCAGAGCTGGCGATGTTCAGTGGATGACCGCAGGCAGGGGAATCATTCACTCTGAGATGCCTGCCCAACCAACCAACAACAACGGCTTGCAGCTATGGATCAACTTATCCGCCAACAACAAGATGATTGAACCCAACTACCAAGAACTTCTGAGCGAGAACATACCATCGGCAGAGCAGGAAGGGGTGGAGGTGAGAGTGATAGCAGGAGAAGCAATGGGGGTGCATTCCCCGGTCTATACTCGAACTCCAACCATGTTCCTTGACTTCACGCTACGTCCCGGAGCTGAGTTGCATCAGAGCATTCCGGAGACATGGAACTCCTTTGTATACGTCATTGAAGGTGAAGGAGTGTTCGGCTCTCCAACTTCATCGCCAACTGGCCCATACCATGTGCTGGTTCTGAGCCAAGGGGATGGCCTCAGCGTCTGGAACAACAACAACAACTCCTCTTCAAAGCCTCTCAGGTTTGTGCTCATTGGAGGCCAGCCACTGAACGAGCCCGTGGCTCAGTATGGCCCTTTTGTCATGAACACACAGTCTGAGATCGAAAAGACCATTGAGGACTATCAGTATTGCAGGAATGGCTTTGAGATGAGGAGGTATTGGACCTCTCTCTAG 969 0.5129 MRGLIARHLHLLPFNRRITTNITTITMSASSSALSTPRLVLKKVLAKSQREGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPGGFPDHPHRGFETVTYVLEGGITHQDFAGHQGTIRAGDVQWMTAGRGIIHSEMPAQPTNNNGLQLWINLSANNKMIEPNYQELLSENIPSAEQEGVEVRVIAGEAMGVHSPVYTRTPTMFLDFTLRPGAELHQSIPETWNSFVYVIEGEGVFGSPTSSPTGPYHVLVLSQGDGLSVWNNNNNSSSKPLRFVLIGGQPLNEPVAQYGPFVMNTQSEIEKTIEDYQYCRNGFEMRRYWTSL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0072 322 CDD cupin_pirin_C 200 280 - -
Amo07g0072 322 Pfam Pirin 58 150 IPR003829 -
Amo07g0072 322 CDD cupin_pirin_N 55 152 - -
Amo07g0072 322 PIRSF Pirin 36 320 IPR012093 -
Amo07g0072 322 Gene3D Jelly Rolls 51 307 IPR014710 -
Amo07g0072 322 Gene3D Jelly Rolls 172 281 IPR014710 -
Amo07g0072 322 Pfam Pirin C-terminal cupin domain 203 312 IPR008778 -
Amo07g0072 322 PANTHER PIRIN-LIKE PROTEIN 31 321 - -
Amo07g0072 322 SUPERFAMILY RmlC-like cupins 38 319 IPR011051 -
Amo07g0072 322 PANTHER PIRIN-RELATED 31 321 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0072 Amo-Chr7 916912 919224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0072 35 317 Calmodulin-binding Proteins AT3G59220 62.676 2.78e-132 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0072 K06911 - gmx:100775597 485.723