Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0069 ATGGGTTGCTTCTCTTGTTTCGATTCGAGGGAGGATCAGAAGCTGAATCCCCATGGCAAGCACGATCACGATCACGATCATATTCGCAAGCAGCATCAGCAGCAGCAGCAGCACCCTCACCCATCCAATCCAGCTCTACCTTCTCACATCTCCCGATTGCCCTCTGGTCTGTTACTGTTTTTTGTCTTGGGGGAATTTGCCAATACTTATGGATCTGCTGTTCTTTCTGTTGGGGTGTGTGTTGCAGGAGCAGACAAGTTGAGGTCCAGAAGTAACGGGGGTTCCAAAAGGGAGCTGCCTGCTCCCAAGGATGGGCCTGGTGTCCAAATTGCTGCTCAAACTTTTACCTTCCGTGAGCTTGCAGCCGCAACTAAGAACTTCAGGCCGGAGTCCTTCATAGGGGAAGGTGGTTTTGGAAGGGTGTACAAAGGGAAGCTGGAGAGCACTGGTCAGATTGTTGCTGTTAAACAGTTAGACAGAAATGGTCTTCAGGGTAATCGGGAATTCCTTGTCGAAGTTCTAATGCTTAGTCTTCTACATCACCCTAACCTTGTGAATCTCATCGGATACTGTGCGGATGGTGAACAGCGCCTCCTTGTTTATGAATTTATGCCATTGGGATCATTGGAAGACCACCTTCATGATCTTCCCCCTGATAAAGAACCATTGGATTGGAACACTAGGATGAAAATAGCTGCAGGGGCTGCAAAAGGACTGGAATACCTGCATGACAAGGCAAATCCTCCAGTTATTTATAGAGACTTCAAGTCATCTAATATATTACTCGACGAAGGATACCACCCCAAGCTTTCTGACTTCGGTCTTGCAAAGCTAGGTCCTGTGGGTGACAAGTCACACGTTTCTACACGTGTGATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTCAAGTCCGACGTATACAGTTTTGGAGTGGTGTTCTTAGAGCTGATTACAGGCCGGAAAGCAATTGACAGCACCCAACCACATGGAGAACAAAACCTTGTCACATGGGCACGTCCACTGTTCAATGACCGCAGGAAGTTTTCAAAGCTGGCTGATCCAAGGCTGCAGGGGAGGTTTCCTATGCGGGGCCTTTACCAGGCTCTAGCTGTGGCATCCATGTGCATCCAAGAATCCGCTGCCACGCGTCCTCTGATTGGGGATGTGGTGACTGCCCTCTCCTATTTGGCCAACCAGGCATATGACCCCAACAATACTGGGCATGGTTATAGGGGCTCTGGTGATGACAAAAGGAACAGAGATGATAAAGGTGCAAGATTATTGAAAAATGATGAAGCTGGAGGATCTGGACACAGATGGGACTTGGAAGGATCTGAGAAAGATGAGTCTCCCAGAGAAACTGCAAGGATGTTGAACAGAGATCTTGACAGAGAACGTGCTGTGGCTGAAGCAAAAATGTGGGGAGAGAACTGGAGAGAAAAAAGAAGACAGAGTTTGGAACCAGGAAGTTTTGATGCTACTAATGTGTAG 1515 0.4799 MGCFSCFDSREDQKLNPHGKHDHDHDHIRKQHQQQQQHPHPSNPALPSHISRLPSGLLLFFVLGEFANTYGSAVLSVGVCVAGADKLRSRSNGGSKRELPAPKDGPGVQIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGKLESTGQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGEQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAYDPNNTGHGYRGSGDDKRNRDDKGARLLKNDEAGGSGHRWDLEGSEKDESPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSLEPGSFDATNV* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0069 504 PANTHER OS07G0668900 PROTEIN 1 496 - -
Amo07g0069 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Amo07g0069 504 Coils Coil 503 504 - -
Amo07g0069 504 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Amo07g0069 504 MobiDBLite consensus disorder prediction 411 430 - -
Amo07g0069 504 ProSiteProfiles Protein kinase domain profile. 127 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0069 504 CDD STKc_IRAK 133 401 - -
Amo07g0069 504 MobiDBLite consensus disorder prediction 13 48 - -
Amo07g0069 504 MobiDBLite consensus disorder prediction 435 470 - -
Amo07g0069 504 MobiDBLite consensus disorder prediction 13 33 - -
Amo07g0069 504 Pfam Protein kinase domain 130 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0069 504 SUPERFAMILY Protein kinase-like (PK-like) 111 399 IPR011009 -
Amo07g0069 504 Gene3D Phosphorylase Kinase; domain 1 101 203 - -
Amo07g0069 504 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 496 - -
Amo07g0069 504 MobiDBLite consensus disorder prediction 485 504 - -
Amo07g0069 504 Gene3D Transferase(Phosphotransferase) domain 1 204 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0069 Amo-Chr7 887308 891247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0069 110 491 Glycoside Hydrolase AT3G07070 63.874 9.87e-167 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Amo07g0069 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0069 K13430 - tcc:18608901 806.979