Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0067 ATGGAGGGGAGAGGGAGTAGTTTTGTGAAGAATGGGGAGCTGAGATTGCCTCCAGGATTCCGGTTTCACCCGACGGATGAAGAGCTGGTGGTTCAATACTTAAAGCGCAAGGTCTTCTCCTGCCCGTTGCCGGCCTCTTTCATTCCTGAGGTTGATATTTGCAAGTCCGATCCATGGGATTTACCAGGTGATTTGGAGCAAGAGAGGTACTTCTTCAGCACGAGGGAGGCCAAATACCCCAACGGGAACCGATCCAACAGAGCCACCAACTCGGGCTACTGGAAAGCCACGGGCTTGGACAAACACATCGCAACTTCAAAAGGCCACCAACTTATTGGCATGAAGAAGACTCTCGTCTTTTACAGAGGCAAGCCTCCTTATGGATCAAGAACAGATTGGATCATGCACGAGTATCGCCTTGTCTCCCACCCCCACCTGCTTCCCATGCAAAATTGGGTTCTCTGTCGCATATTCTTCAAGAGGAGAGCACCTGCTACTGCTAAGAATGTTCTACTGGATCACAATTCCCATTCGGCATCAGCATCAGAAGAGGCCTTCACCATCAGCCATGAGGGCAGCAACTCTAAGGTGGTTTTCTACGATTTCTTGGCACAGAACAGGGCTGATTTGAACCGCGTGACCCCTCCTGCTTCTTCGACCTCTGGCACCAGTGGAATCACCACCGAATCCGATGAGCATGAAGACAGCAGTAGCTGCAACAACTTTCCTTTTTTCAGATGTAGCAAGCATCAATCCGGCAGGAAACCGACCGGCATTAAAGATATTTTAAATCTGAATTTGAAGAGTATCCCCTTCTACTCATACTAG 828 0.494 MEGRGSSFVKNGELRLPPGFRFHPTDEELVVQYLKRKVFSCPLPASFIPEVDICKSDPWDLPGDLEQERYFFSTREAKYPNGNRSNRATNSGYWKATGLDKHIATSKGHQLIGMKKTLVFYRGKPPYGSRTDWIMHEYRLVSHPHLLPMQNWVLCRIFFKRRAPATAKNVLLDHNSHSASASEEAFTISHEGSNSKVVFYDFLAQNRADLNRVTPPASSTSGTSGITTESDEHEDSSSCNNFPFFRCSKHQSGRKPTGIKDILNLNLKSIPFYSY* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0067 275 Pfam No apical meristem (NAM) protein 17 140 IPR003441 GO:0003677|GO:0006355
Amo07g0067 275 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 7 246 - -
Amo07g0067 275 MobiDBLite consensus disorder prediction 213 235 - -
Amo07g0067 275 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 246 - -
Amo07g0067 275 Gene3D NAC domain 25 164 IPR036093 GO:0003677|GO:0006355
Amo07g0067 275 ProSiteProfiles NAC domain profile. 16 160 IPR003441 GO:0003677|GO:0006355
Amo07g0067 275 MobiDBLite consensus disorder prediction 213 227 - -
Amo07g0067 275 SUPERFAMILY NAC domain 12 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0067 Amo-Chr7 830794 832141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0067 8 242 NAC Transcription Factor Family AT5G13180 61.290 5.71e-101 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo07g0067 NAM 3.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0067 - - aip:107635778 545.043