Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0064 ATGGGCGCGCGCTCGGCTTTGCTTGTGCGCGCACCTGCAGCATCCAACAATGTCCAGTTATTGTTCACGTTCGTTAACATTATTATTGTTGCTCTTTTGGGGATTCTATCACCGTGCTCTTCCTATTCGGATGCTGAGGCGCTCTTGAAGTTCAGGGCTTCATTGAGAAATGCGGTTGCCCTCAGCAGCTGGGATCCATCCATAAACCCAAAGCCACCGTGCTCTGGCAACACTGCCAGTTGGGTGGGTCTGTATTGTAATCAAGACAAAGTTTGGGGGTTACGCCTGGAGAGCATGGGCCTCAACGGCAACATTGACATGGCTTCTCTCTCTTCAATGCCCGCTTTGCGGATGCTTAGCCTAATGAACAATACCTTTGCGGGTCCCTTGCCCAACATTAAGATGCTGCCCAATTTGAAGGCCCTCTTCCTGTCCTTTAATCATTTCTCCGGAGACATACCTGATGATGCATTTGCAGGTTTGAGTCGATTGAGAAAGCTTTATTTGGCAAATAACGATTTCACCGGTAAAATTCCTTCTTCCATTGCCGCATTGCCTAGTCTCCTCTACCTCAGGCTTGATGCAAACAAGTTTCACGGCCAAATTCCCGATTTTCCACGCAGCAATGGTTTAAAGACTTTCAACCTCGCTAACAATGATTTAGAGGGCCCCATCCCAGCCAGTCTAAGCACCTTCGATCCTACCTCCTTTAGCGGAAACAGACGTTTATGCGGGCGACCACTGACAAATCCTTGCCCACCAGCTACAACAGGAAGCCAGGATGGTCAAGGCAAAGACCAGGTTATGAAAACTGTAGTGATTGTGATCGTGGTGGCGGTGGTTGTAGCTTTCCTGGTTACAGTCTTAGTCATATGGCGGTTGAGACTCAAGTCTCGCGATCTCAATCAAATAAATAATAATGAGGTCCCAAAGTTCCAAGGCCAGACCTCCGACAAGTTCGTTCCTCCCGTTTACGTCAAAACCAAAAGCCTAGCGGAACAATATGATGCTGCTACAACTCCTAAGCAGGTGCTCAGTTCTGTACATTCCAAGAAGGTGGAGCAAGGCAAGCTCTTATTCCTGAATTGTGACACCGGACTCAAGTTTGATTTGCAGGATTTGTTAAGGGCCTCGGCCGAAATTCTAGGCAGTAACACATTTGGCTCTTCCTACAAGGCCGTTATCCTGGACGGTCAAGCTGTGGTTGTCAAGAGGTACAAGCAAATGAACAATGTGCCGAGAGAGGAGTTCCATGAGCACATGAGAAGGCTTGGAAACCTCAACCATCCCAATATTCTGCCCTACATGGCCTATTACTATAGGAAAGAAGAGAAGCTCTTGATCTCTGCCTATGTTCAAAATCGTTGCTTAGCCAGCCATCTTCATGGAAATCACAAGAATAAAAAGCAGGGGCTTGACTGGCCAACCCGATTGAAAATAGTGAAAGGTGTGGCGAGGGGATTGGCCTACCTATACAACGCACTCCCAAGCGTTGTTACGCCTCATGGTCACCTCAAATCTTCCAATGTGCTTTTGGATGAATCTTTTGAGCCCCTACTGACCGATTATGGGCTCAGTCCTTTGATCAACCTTGATCGTGCCCAACAAGTCATCATGCCTTACAGATCACCCGAGTATGCTCAACTTGGGCGTATAACAAGGAAGACTGATATGTGGAGTTTTGGAATTCTGATTCTAGAGATTTTGACAGGTAAATTTCCAGAGAACTATCTGGCACAGACACATAACAGTGATTCGGACATTGCCAGTTGGGTCAATACCATGATTACCGAGAAGCACACCAGCGACGTGTTTGACGCAGACATGGGAGGATTTGGCAATAGTAAAGCTGAATTGCTCAAACTCTTAAAGATTGGCTTGAGTTGTTGCGAGGAGAACGTGGAAAGAAGGTTAGATATCAAGGAAGCTCTTGACCAAATCGAAGACTTGAAGGAGGCTGAAAGTGATGGAGAATACTCTTCTACTACTTTAGTCACTTCCGACCGGGATGCCTATAGAGCCGTGTGA 2028 0.4699 MGARSALLVRAPAASNNVQLLFTFVNIIIVALLGILSPCSSYSDAEALLKFRASLRNAVALSSWDPSINPKPPCSGNTASWVGLYCNQDKVWGLRLESMGLNGNIDMASLSSMPALRMLSLMNNTFAGPLPNIKMLPNLKALFLSFNHFSGDIPDDAFAGLSRLRKLYLANNDFTGKIPSSIAALPSLLYLRLDANKFHGQIPDFPRSNGLKTFNLANNDLEGPIPASLSTFDPTSFSGNRRLCGRPLTNPCPPATTGSQDGQGKDQVMKTVVIVIVVAVVVAFLVTVLVIWRLRLKSRDLNQINNNEVPKFQGQTSDKFVPPVYVKTKSLAEQYDAATTPKQVLSSVHSKKVEQGKLLFLNCDTGLKFDLQDLLRASAEILGSNTFGSSYKAVILDGQAVVVKRYKQMNNVPREEFHEHMRRLGNLNHPNILPYMAYYYRKEEKLLISAYVQNRCLASHLHGNHKNKKQGLDWPTRLKIVKGVARGLAYLYNALPSVVTPHGHLKSSNVLLDESFEPLLTDYGLSPLINLDRAQQVIMPYRSPEYAQLGRITRKTDMWSFGILILEILTGKFPENYLAQTHNSDSDIASWVNTMITEKHTSDVFDADMGGFGNSKAELLKLLKIGLSCCEENVERRLDIKEALDQIEDLKEAESDGEYSSTTLVTSDRDAYRAV* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0064 675 SUPERFAMILY Protein kinase-like (PK-like) 380 649 IPR011009 -
Amo07g0064 675 Coils Coil 633 653 - -
Amo07g0064 675 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 20 659 - -
Amo07g0064 675 Gene3D Ribonuclease Inhibitor 43 158 IPR032675 -
Amo07g0064 675 Pfam Protein kinase domain 379 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0064 675 Gene3D Ribonuclease Inhibitor 159 256 IPR032675 -
Amo07g0064 675 SUPERFAMILY L domain-like 71 232 - -
Amo07g0064 675 Gene3D Phosphorylase Kinase; domain 1 342 451 - -
Amo07g0064 675 ProSiteProfiles Protein kinase domain profile. 376 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0064 675 Pfam Leucine rich repeat 137 198 IPR001611 GO:0005515
Amo07g0064 675 Pfam Leucine rich repeat N-terminal domain 43 87 IPR013210 -
Amo07g0064 675 Gene3D Transferase(Phosphotransferase) domain 1 452 670 - -
Amo07g0064 675 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0064 Amo-Chr7 745688 748056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0064 28 666 Receptor kinase-like Gene Family AT5G35390 47.424 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo07g0064 Pkinase 1.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0064 - - gmx:100801053 894.804