Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0061 ATGGCCCGCTCTACCTCGCGGGGTTCCAACTCCTCTCCCAATGGCCTCCTCACAGTTACCATCGCTGGCGGCCGCCATGACCACGTGGACCCCGCTTCGAACAACGAAGAAGAAGAAGACGATGAACTAGTGGATCCCGATGATCCTTTTGACGTTATCCACACCAAGAACGTCCCGCTCCAGACGCTCAAGCGTTGGAGACAAGCAGCATTGGTTCTGAATGCCTCCAGGCGTTTTAGATATACTTTGGACTTGAAAAAGGAAGAGGAGAAAGAGCAAAAGAAAAGCATGATTAGAGCCCATGCACAAGTCATAAGAGCAGCTTTGCTTTTCAGATTGGCTGGGGAACGGGAACTAGTGACAAATACAGCAGCGCCATCCCTGGCAGCCCCAACTCCTGATGGTGACTATGCAGTTGGACTCGAACAACTAGTTTCGATGTTTAAGGATCAGAACGTTCTTGCTTTGCAACACTATGGAGGGGTTAGGGGCTTAGCGGATATACTAAAATCAAATCCGGAGAAAGGCATTAGTGGAAGTGATATTGATCTATCAAAAAGGAAAATAGCATTTGGAACTAATACATATCCTCGGAAAAAGGGCAGAAGTTTCTGGAGGTTTCTTTGGGAATCTTGGCAAGATCTGACGCTTATAATATTGATTATAGCAGCTGTGGTATCATTGGCACTTGGAATAAAAACAGAGGTGTGTGAATAA 717 0.4644 MARSTSRGSNSSPNGLLTVTIAGGRHDHVDPASNNEEEEDDELVDPDDPFDVIHTKNVPLQTLKRWRQAALVLNASRRFRYTLDLKKEEEKEQKKSMIRAHAQVIRAALLFRLAGERELVTNTAAPSLAAPTPDGDYAVGLEQLVSMFKDQNVLALQHYGGVRGLADILKSNPEKGISGSDIDLSKRKIAFGTNTYPRKKGRSFWRFLWESWQDLTLIILIIAAVVSLALGIKTEVCE* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0061 238 Gene3D - 60 112 - -
Amo07g0061 238 MobiDBLite consensus disorder prediction 1 49 - -
Amo07g0061 238 SUPERFAMILY Calcium ATPase, transmembrane domain M 158 231 IPR023298 -
Amo07g0061 238 SMART Cation_ATPase_N_a_2 156 232 IPR004014 -
Amo07g0061 238 MobiDBLite consensus disorder prediction 1 18 - -
Amo07g0061 238 Pfam Cation transporter/ATPase, N-terminus 158 227 IPR004014 -
Amo07g0061 238 Pfam Ca2+-ATPase N terminal autoinhibitory domain 47 90 IPR024750 GO:0005516
Amo07g0061 238 PANTHER - 45 235 IPR000528 GO:0006869|GO:0008289
Amo07g0061 238 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 45 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0061 Amo-Chr7 705546 706766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0061 9 235 Primary Pumps ATPases AT3G21180 60.435 3.27e-84 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0061 K01537 - ahf:112703833 421.009