Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0059 ATGACTGGTGAAAGCAAAATTGTTCAGAAGGATCACAAGGCACCATTTTTGATGTCCGGTTGCAAAGTAGCAGATGGAGTTGGTACTATGCTGGTAACAGGTGTTGGCATTAACACTGAATGGGGACTGTTGATGGCAAGTATCTCAGAGGATAATGGGGAAGAGACTCCGTTACAGGTACGTTTGAATGGAGTAGCAACGTTTGTTGGCATAGTTGGGCTTACTGTCGCCGTTTCTGTTCTTGCAGTCCTCTTGGGAAGATACTTCTCTGGCAATACAAAAGATGTAGACGGACAAGTGCAATTTGTAGCGGGAAAGACTAGTATTAGTGATGCAGTTGACGGGGTCATCAAACTCTTTACCATTGCAGTTACAATTGTTGTTGTTGCAGTGCCTGAAGGTCTACCTTTGGCAGTTACCTTAACCCTGGCCTTCTCTATGCGGAAAATGATGGCAGACAAAGCATTGGTTCGAAGGCTATCAGCATGTGAAACTATGGGCTCCGCCACAACAATTTGTAGTGATAAGACCGGAACTTTGACCTTGAATCAGGTGGTTGAGGCATATGCTGGGAGGAAGAAACAAGATCCACCCGATGACTCGTCGAAGTTGCATCCAGAAGTTCTATCCCTCATAAATGAAGGCATTGCACAGAATACTACGGGCAATGTTTTTGTGCCTAAGGATGGTGGAGAGGCAGAGATTTCAGGATCTCCAACCGAGAAGGCAATTCTTTCTTGGGCCGTGAAGTTGGGGATGAATTTTGATCTTACCAGATCAAATTCGACAGTTCTCCACGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCTCTAAAGATGGGGGTTTCTGGAGTACATATACATTGGAAAGGAGCTGCAGAAATAGTTCTAGGAGCCTGCACTCAATATCTTGATTCAAATGGTCAGTTGCAATCTATTGAAAAAGACAAGGTATTCTTCACGGAGGCCATTGAAGACATGGCTGTCCAGAGCTTGCGCTGTGTGGCCATTGCGTACAGACCATACGAATTGGACAAAGTTCCCTCTAAGCAAGAGGATTTAGACAAGTGGTCCTTGCCAGAACAGGAGCTTATTTTGCTTGCTATTGTTGGGATAAAGGATCCTTGTCGGCCCGGAGTGAAAGAAGCTGTAAGACTATGCTCTCAAGCAGGTGTTAAGGTACGGATGGTTACGGGGGATAATCTGAATACAGCAAAGGCAATAGCTTTGGAGTGTGGAATACTGAGTTCAAAGGAAGAGGCGGTGGAGCCAAATATAATTGAAGGGAAGACATTCCGTGAACTATCTGAAATAGAAAGGGAACAAGTTGCTAAGAAAATAACGGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTCGTGCAAGCGCTGCGTAAATTGGGTGAAGTTGTTGCAGTCACAGGGGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCCGATATTATAATTCTTGATGATAACTTTGCATCAGTAGTTAAGGTTGTTCGATGGGGCCGTTCAGTATATGCGAATATTCAAAAATTCATTCAGTTCCAACTCACTGTTAACGTTGCTGCTCTTGTAATAAATGTTGTGGCCGCCGTATCTGCTGGTGAAGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTGATCATGGACACTCTTGGAGCCCTTGCACTAGCTACGGAACCACCAACTGACAGCCTTATGCGCAGATCACCAGTTGGCCGAAGGGAATCTCTTATAACTAATGTCATGTGGAGGAACTTGGTCATACAGGCTGTCTATCAAGTGACCATTCTTCTCATTCTTAATTTCGGTTGGCAAAGTATTAATTTAGGTGATGATCAAGATTCTAAATCTCACTCCTTACAAGTGAAGAATACTTTAATATTCAACACATTCGTTCTATGCCAAATATTTAACGAGTTCAATGCTAGAAAAATAGATCAAATGAATGTTTTCAAAGGAGTGACTAAGAATCGTCTCTTCATGGGAATTGTTGGAATGACATTTGTGCTTCAGATACTAATCATCGAGTTTCTCGGAAAATTCACCTCAACAGTGCGCCTTGACTGGAAACTTTGGTTATTTTCTCTTGGTATTGGGATAATCAGCTGGCCTCTTGCTGTAGTTGGAAAACTAATTCCAGTTCCGAAAACACCATGGTCACGGACCTTAAAGAAGCATATCAGACGACTCAAGAAGTCTCGTACTACTGCTGCTGCGCAACCACAATAG 2316 0.4352 MTGESKIVQKDHKAPFLMSGCKVADGVGTMLVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFVGIVGLTVAVSVLAVLLGRYFSGNTKDVDGQVQFVAGKTSISDAVDGVIKLFTIAVTIVVVAVPEGLPLAVTLTLAFSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQVVEAYAGRKKQDPPDDSSKLHPEVLSLINEGIAQNTTGNVFVPKDGGEAEISGSPTEKAILSWAVKLGMNFDLTRSNSTVLHVFPFNSEKKRGGVALKMGVSGVHIHWKGAAEIVLGACTQYLDSNGQLQSIEKDKVFFTEAIEDMAVQSLRCVAIAYRPYELDKVPSKQEDLDKWSLPEQELILLAIVGIKDPCRPGVKEAVRLCSQAGVKVRMVTGDNLNTAKAIALECGILSSKEEAVEPNIIEGKTFRELSEIEREQVAKKITVMGRSSPNDKLLLVQALRKLGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSAGEVPLNAVQLLWVNLIMDTLGALALATEPPTDSLMRRSPVGRRESLITNVMWRNLVIQAVYQVTILLILNFGWQSINLGDDQDSKSHSLQVKNTLIFNTFVLCQIFNEFNARKIDQMNVFKGVTKNRLFMGIVGMTFVLQILIIEFLGKFTSTVRLDWKLWLFSLGIGIISWPLAVVGKLIPVPKTPWSRTLKKHIRRLKKSRTTAAAQPQ* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0059 771 Pfam haloacid dehalogenase-like hydrolase 170 492 - -
Amo07g0059 771 PANTHER CALCIUM-TRANSPORTING ATPASE 1 753 - -
Amo07g0059 771 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 1 743 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Amo07g0059 771 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 110 185 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo07g0059 771 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 445 558 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo07g0059 771 Gene3D - 170 523 IPR023214 -
Amo07g0059 771 SFLD C1.7: P-type atpase like 155 530 - -
Amo07g0059 771 Pfam E1-E2 ATPase 1 151 - -
Amo07g0059 771 ProSitePatterns E1-E2 ATPases phosphorylation site. 175 181 IPR018303 -
Amo07g0059 771 Gene3D - 183 378 IPR023299 GO:0000166
Amo07g0059 771 SUPERFAMILY HAD-like 171 583 IPR036412 -
Amo07g0059 771 PANTHER CATION TRANSPORTING ATPASE 1 753 - -
Amo07g0059 771 Pfam Cation transporting ATPase, C-terminus 563 741 IPR006068 -
Amo07g0059 771 Gene3D - 50 732 - -
Amo07g0059 771 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 204 375 IPR023299 GO:0000166
Amo07g0059 771 SFLD p-type atpase 155 530 IPR044492 -
Amo07g0059 771 SUPERFAMILY Calcium ATPase, transduction domain A 1 46 IPR008250 -
Amo07g0059 771 Gene3D - 5 49 - -
Amo07g0059 771 PRINTS P-type cation-transporting ATPase superfamily signature 371 382 - -
Amo07g0059 771 PRINTS P-type cation-transporting ATPase superfamily signature 393 403 - -
Amo07g0059 771 PRINTS P-type cation-transporting ATPase superfamily signature 478 497 - -
Amo07g0059 771 PRINTS P-type cation-transporting ATPase superfamily signature 173 187 - -
Amo07g0059 771 PRINTS P-type cation-transporting ATPase superfamily signature 502 514 - -
Amo07g0059 771 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 745 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0059 Amo-Chr7 691069 696021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0059 1 763 Primary Pumps ATPases AT3G21180 78.562 0.0 1195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0059 K01537 - gmx:100817367 1257.66