Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0046 ATGGGCAACACATGCCGTGGATCTTTGAGAGGAAAATATTTTCAGGGCTTCAGCCAGCCCGAAGACCCCTCCAGGCGCAGCAATCCTTCTGACCCCTCCGACTCAGAGCACCTCCCCAAGCAGAATCCCAATTCAGCAGACAACAACAACAACAGCAACAACAACAACAACAACATCAACATCAACAACAACAAGAGAAATCTACCCTTCAAGAAGGACACCATCATGCGCAGAGGCCCCGACAACCAAGCTTATTATGTCCTGGGTCATAAGACTCACAACATTCGTGATCTCTACACTCTTGGCCGCAAACTGGGTCAGGGCCAATTTGGCACCACTTATTTATGCACCGAGAATTCCACCAACATCGAATACGCATGTAAATCCATCTCCAAGAGGAAGTTGATTTCCAAGGAGGACGTGGAAGACGTTAGGAGAGAAATTCAAATAATGCACCATTTAGCTGGTCACAAGAACATCGTCACCATCAAGGGTGCTTATGAGGATCCTCTCTACGTCCATATTGTCATGGAGCTTTGTTCTGGGGGTGAGTTGTTTGATCGCATCATCCAAAGGGGCCACTACACCGAGAGGAAGGCTGCTGAGTTGACCAAAATCATTGTTGGAGTTGTTGAGACTTGCCATTCCCTCGGGGTTATGCATAGAGATCTTAAGCCTGAAAACTTCTTGTTGGTTAATAAGGATGATGATTTCTCTCTTAAAGCAATTGACTTTGGCCTCTCTGTTTTCTTCAAACCAGGTCAAGTATTCACTGACGTGGTTGGCAGTCCGTACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGCCCCGAAGCAGATGTGTGGACAGCGGGCGTCATTCTATACATACTACTTAGTGGAGTGCCGCCGTTTTGGGCAGAAACCCAGCAGGGTATATTTGATGCTGTTTTGAAGGGGCATATAGATTTCGACTCTGATCCATGGCCTTTAATTTCTGATAGTGCTAAAGATCTGATTAGAAAGATGCTGTGTTCTCGGCCTTCAGAACGGTTGACAGCTCATGAAGTGTTATGTCATCCATGGATATGTGAAAATGGAGTTGCCCCTGACAGAGCATTGGACCCTGCTGTTCTTTCCCGCCTTAAACAGTTCTCTGCAATGAACAAACTAAAGAAGATGGCTTTGCGGGTAATTGCTGAAAGTTTGTCCGAAGAGGAGATTGCTGGTTTGAGAGAGATGTTTCAAGCTATGGATACTGATAACAGTGGTGCAATTACTTTTGATGAGCTTAAAGCTGGTCTAAGAAGATATGGGTCAACCCTTAAGGATACAGAAATACGTGATCTTATGGAGGCGGCTGATGTGGACAATAGTGGGACTATAGATTATGGAGAGTTTATCGCTGCAACAATTCATCTCAACAAGCTAGAGCGCGAGGAACATCTCATTGCAGCATTTCGATATTTTGACAAGGATGGGAGTGGCTATATTACAGTTGACGAACTTCAACAAGCTTGTATAGAACATAACATGACTGACGTTTTTCTTGAAGATATTATTAGGGAAGTTGATCAAGATAATGATGGAAGGATTGATTATGGTGAATTTGCTGCCATGATGCAAGGCAATGCTGGAATTGGAAGGAGGACTATGCGCAACAGCCTGAATTTAAGCATGAGAGATGCACCAGGTGTCTGA 1683 0.4468 MGNTCRGSLRGKYFQGFSQPEDPSRRSNPSDPSDSEHLPKQNPNSADNNNNSNNNNNNININNNKRNLPFKKDTIMRRGPDNQAYYVLGHKTHNIRDLYTLGRKLGQGQFGTTYLCTENSTNIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVETCHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSAKDLIRKMLCSRPSERLTAHEVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYGEFIAATIHLNKLEREEHLIAAFRYFDKDGSGYITVDELQQACIEHNMTDVFLEDIIREVDQDNDGRIDYGEFAAMMQGNAGIGRRTMRNSLNLSMRDAPGV* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0046 560 ProSitePatterns EF-hand calcium-binding domain. 449 461 IPR018247 -
Amo07g0046 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Amo07g0046 560 MobiDBLite consensus disorder prediction 34 69 - -
Amo07g0046 560 Pfam Protein kinase domain 99 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0046 560 PANTHER SERINE/THREONINE-PROTEIN KINASE 59 543 - -
Amo07g0046 560 Gene3D - 367 538 - -
Amo07g0046 560 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Amo07g0046 560 ProSiteProfiles EF-hand calcium-binding domain profile. 436 471 IPR002048 GO:0005509
Amo07g0046 560 Pfam EF-hand domain pair 405 465 IPR002048 GO:0005509
Amo07g0046 560 Pfam EF-hand domain pair 475 536 IPR002048 GO:0005509
Amo07g0046 560 ProSitePatterns EF-hand calcium-binding domain. 485 497 IPR018247 -
Amo07g0046 560 ProSiteProfiles Protein kinase domain profile. 99 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0046 560 SMART efh_1 440 468 IPR002048 GO:0005509
Amo07g0046 560 SMART efh_1 476 504 IPR002048 GO:0005509
Amo07g0046 560 SMART efh_1 404 432 IPR002048 GO:0005509
Amo07g0046 560 SMART efh_1 510 538 IPR002048 GO:0005509
Amo07g0046 560 SUPERFAMILY Protein kinase-like (PK-like) 81 381 IPR011009 -
Amo07g0046 560 SMART serkin_6 99 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0046 560 Gene3D Transferase(Phosphotransferase) domain 1 185 366 - -
Amo07g0046 560 Gene3D Phosphorylase Kinase; domain 1 101 184 - -
Amo07g0046 560 ProSiteProfiles EF-hand calcium-binding domain profile. 511 541 IPR002048 GO:0005509
Amo07g0046 560 MobiDBLite consensus disorder prediction 1 69 - -
Amo07g0046 560 ProSitePatterns EF-hand calcium-binding domain. 519 531 IPR018247 -
Amo07g0046 560 CDD STKc_CAMK 99 356 - -
Amo07g0046 560 SUPERFAMILY EF-hand 381 538 IPR011992 -
Amo07g0046 560 ProSiteProfiles EF-hand calcium-binding domain profile. 472 507 IPR002048 GO:0005509
Amo07g0046 560 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 4 59 543 - -
Amo07g0046 560 ProSitePatterns EF-hand calcium-binding domain. 413 425 IPR018247 -
Amo07g0046 560 ProSiteProfiles EF-hand calcium-binding domain profile. 400 435 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0046 Amo-Chr7 547759 554068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0046 1 557 EF-hand Containing Proteins AT2G17290 82.447 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Amo07g0046 Pkinase 3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0046 K13412 - gmx:100778173 988.793