Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0041 ATGGATAACGAGGTGTTAGAATTTGATATTGGGCTGGAAGGAGGGGAGYGAGAATGCGAGGATGATGAGGGCGACATTGAGCACCCTATGGCTATGGCCATGGCTATCGAAGAGGATGAACTGGCTGATGCTGACAGAGGCAGAGGCACTGCCACTAGTGGTAGCGGTGGAGAAATTTACGTTCCTGAGGGTTTTGGTGCGGGTGACCTCTTAGATCTTGAACCTTACGAGGGCATGGAATTTGAGTCTGAGGAGGCTGCCAAGGCCTTCTACAATTCTTATGCCCGTCGTYTCGGGTTCAGTACTCGGGTTAGCTCATCCCGGCGTTCCAGGCGCGATGGAGCCATCATACAGAGGCAATTTGTTTGTGCAAAGGAGGGTTTCCGCAACTTGAATGAGAAACGCACCAAGGATAGGGAGATCAAGCGTCCTCGAACCATTACCAGAGTCGGATGCAAAGCGGCTTTGTCGGTCAAAATGCACGACTCTGGCAAGTGGATCGTCTCTGGGTTTGTTAGGGAACACAACCACGAGCTTGTTCCACCGGATCAGGTGCACTGCCTTCGCTCTCACAGACAAATATCTGGAGCTGCCAAGACGCTAATTGATACTTTACAGGCTGCTGGAATGGGTCCTCGGAGAATTATGTCAGCACTGATCAAGGAGTGTGGTGGGATTAGCAAAGTTGGTTTTACAGAGGTTGACTGTAGGAATTACATGAGGAATAATAGGCAGAGAAGTCTAGAAGGCGACATTCAGCTTTTCTTCAAGTTGTATGAGAAAGCACTGGATAGTCGCAATGAGAAAGAAGTCAGAGCAGATTATGACACAATGAATAGTTCACCAGTTTTGAAGACCCCATCRCCAATGGAGAAGCAAGCATCTGAGCTTTACACACGAAAGATTTTCATGAGGTTCCAAGAGGAGCTAGTTGGGACGCTAACATTCATGGCATCCAAAACCGAGGATGATGGGGAGGTCGTTACATATCATGTAGCTAAATTTGGAGAGGATCATAAGGCATACTATGTTAAATTCAATGTTTTAGAGATGAAAGCGAGTTGTAGTTGCCAAATGTTTGAATTTTCRGGCCTTGTTTGTAGACATGTTTTGGCAGTGTTTAGAGTAACCAATGTACTRACTCTACCCGCTCATTATATATTGAAACGTTGGACGAGAAATGCCAAAAGCAGTGTWACATTAGAAGAACATTCTTGTGATATATATTCTTACTATTTGGAATCTCATACAGTTAGATATAATACCCTCAGACACGTGGCCTTTAAGTTTGTTGATGAAGGAGCAAAGTCTCCTGAGACTTATGATGTTGCAATGGGTGCTTTACAAGAYGCCACAAAAAGAGTTGTTCAAGTAATGCAAAGTGAGGYACGAATTCTCATCAACAATGGCAAAGTTAGGAGTCACTTGCAAATTGATGAAAGTCATACTAATTCCAGAAGTGGACACGAGGAAGGAAACTTGGGCCAGCATATGTCCGAGGATGACATGGACAAGAGCATTAGAGAACTTATGAATGAGCTTGAGTTTGCAAATCGAAAGTGTGAAATTTACCGGTCCAACCTGCTCTCAGTTTTGAAAGCTGTTGAGGATCATAAGTTAGAGTTGTCAATTAAGGTGGAAAACATCAAGATAAGCATTAAAGATGGCCTCTAA 1674 0.4409 MDNEVLEFDIGLEGGEXECEDDEGDIEHPMAMAMAIEEDELADADRGRGTATSGSGGEIYVPEGFGAGDLLDLEPYEGMEFESEEAAKAFYNSYARRXGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKAALSVKMHDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKECGGISKVGFTEVDCRNYMRNNRQRSLEGDIQLFFKLYEKALDSRNEKEVRADYDTMNSSPVLKTPSPMEKQASELYTRKIFMRFQEELVGTLTFMASKTEDDGEVVTYHVAKFGEDHKAYYVKFNVLEMKASCSCQMFEFSGLVCRHVLAVFRVTNVLTLPAHYILKRWTRNAKSSVTLEEHSCDIYSYYLESHTVRYNTLRHVAFKFVDEGAKSPETYDVAMGALQDATKRVVQVMQSEXRILINNGKVRSHLQIDESHTNSRSGHEEGNLGQHMSEDDMDKSIRELMNELEFANRKCEIYRSNLLSVLKAVEDHKLELSIKVENIKISIKDGL* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0041 557 MobiDBLite consensus disorder prediction 477 502 - -
Amo07g0041 557 SMART 26again6 353 380 IPR006564 GO:0008270
Amo07g0041 557 ProSiteProfiles Zinc finger SWIM-type profile. 342 378 IPR007527 GO:0008270
Amo07g0041 557 Pfam SWIM zinc finger 330 376 IPR007527 GO:0008270
Amo07g0041 557 Coils Coil 500 527 - -
Amo07g0041 557 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 252 523 - -
Amo07g0041 557 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 59 255 - -
Amo07g0041 557 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 252 523 IPR031052 GO:0006355
Amo07g0041 557 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 59 255 IPR031052 GO:0006355
Amo07g0041 557 Pfam FAR1 DNA-binding domain 90 181 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0041 Amo-Chr7 504928 508374 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo07g0041 FAR1 5.9e-33 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0041 - - adu:107496170 602.053