Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0033 ATGTTCTTTGCGCACAGAGAGAACACAGTTAGCCCACTTGGTCGTGTTGTGCTGATAATATGGCTTTTTGTGGTTCTAATAATCAATTCAAGTTACACGGCAAGCTTGACGTCAATTCTAACTGTGCAGCAGCTGTCCTCACCCATAACGGGCATTGACACCTTGATAACAAGCAACAAGCCCATAGGATTCCAGGTAGGGTCATTTGCTGAGAACTATCTCACTCAGGAACTGAACATCCCAAAACATAGGCTTGTTCCCCTTGGCTCGCCAGAAGAATATGCTACTGCCCTTGAGAAGGGAACTGTTGCCGCTGTGGTAGATGAACGCCCATATGTTGAACTCTTCCTGTCAGAACACTGCCATTTCTCAATTAGGGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCATTCCGGAGGGACTCTCCTTTAGCCATTGACATGTCAACTGCCATTCTGAGTCTATCCGAGAACGGTGAACTTAGYAAGATCCATGATAAGTGGCTTTCAAAGAAGGCCTGTGGTTTTCGCGGTGCACAGGATGAGCAGCTTCAATTYAACAGTTTCCGGGGCCTATTCCTGATCTGCGGGATAGCGTGTTTGGCGGCGCTCCTTATCTACTTGCCCTCGGTGGCATACCAATTCAGTCAGAACTCCCCGGAAAGAGAGAGASGCAATCATCCTTTTGGTCATTCCAGCACCTCACGTTCTGCACGCATACAGACATTTCTAAGCTTCGTTGATGAAAAGGAAGACACATCACGCAACAACAGCAAGTTTAAAAGGAAACTTGAGGATATCTCATCTTCCAGATCCAGATCCAGAACCAGAATCAGCCGTTTAAGGACCATGGCCATGCCCAAGAAATTACACATACACATAGGCACTTCTCAACAGTCAGGACCAAATGCCGGMTACTCAGGTTCCACCGATCAAGCAATCAAKTAG 951 0.4679 MFFAHRENTVSPLGRVVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIDTLITSNKPIGFQVGSFAENYLTQELNIPKHRLVPLGSPEEYATALEKGTVAAVVDERPYVELFLSEHCHFSIRGQEFTKSGWGFAFRRDSPLAIDMSTAILSLSENGELSKIHDKWLSKKACGFRGAQDEQLQFNSFRGLFLICGIACLAALLIYLPSVAYQFSQNSPERERXNHPFGHSSTSRSARIQTFLSFVDEKEDTSRNNSKFKRKLEDISSSRSRSRTRISRLRTMAMPKKLHIHIGTSQQSGPNAGYSGSTDQAIX* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0033 316 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 286 - -
Amo07g0033 316 SMART GluR_14 5 172 IPR001320 GO:0015276|GO:0016020
Amo07g0033 316 Gene3D - 96 177 - -
Amo07g0033 316 Pfam Bacterial extracellular solute-binding proteins, family 3 32 171 IPR001638 -
Amo07g0033 316 Pfam Ligand-gated ion channel 2 201 IPR001320 GO:0015276|GO:0016020
Amo07g0033 316 MobiDBLite consensus disorder prediction 294 316 - -
Amo07g0033 316 PANTHER GLUTAMATE RECEPTOR 3.6 1 286 - -
Amo07g0033 316 MobiDBLite consensus disorder prediction 290 316 - -
Amo07g0033 316 Gene3D - 1 78 - -
Amo07g0033 316 SUPERFAMILY Periplasmic binding protein-like II 31 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0033 Amo-Chr7 425722 426857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0033 1 264 Ion Channels AT2G17260 63.838 8.69e-114 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0033 K05387 - jre:108997407 369.392