Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3124 ATGAATGATAAAGCCATCAACTTCATTCATTGTGCACTTAACGAGCATGATTATATGAAGATCTCTACATGTGAAACCGCTAAAGAGATTTGGGATAAACTCCAAATCACTTACGAAGGAACCGACCACGTTAAAGAATCAAAGGTATTTATGTTGGTTCATGAATGGGAAAATTTTAAAATGAAAGATGAAGAGAGCATTGAAGAAGCTCTTGAAAGACTCTCCAAGATCTTCAACAATCTAAGCATGCTTGGCACAAAATACAATGATAAACAAATTGTGACCAAGGTGCTTACAAGCCTTACACCAAAATGGAACTCCAAAAAGAAGGAGAAAGCATACATATCATGGGAGAACGAGGATGAATCCGACTCCGATAACGACGAGGTTGCAAATCTTTGCTTAATGGCAAGCGAAGAAAAGGTTAGTGATGACAACTCCACTTCTTTTAATTTACAAGATGAATATGATGCCTTACTTGAGGTAACATTAAGAGTGGAACCAAGTTTCAAAAGAAGCATAACCTACAATTTCACGTCCGATGTTGGTCTTGAAGATTTGTACGTAGATCATGCAAATAAATATGAGTTTGCAGACATAACTTGGTATCCATCACAACACACTGCTGTTTATAGATATGATTCAAGGGTTCCCTTAAATACTTCCGGTAATGCATCCTTGATGCTTCGGTATTTTTGTAGAAAAAACAAGAAACACGCATGGGAAATGCTTAACAGCAGCAGCAACATTAAACAATGGCATCTTTTCACTGGCTATCCAGTAATCGGTTACCAAAGCAAAATGCAAACCTCAGGTTCATGCTTATACTCCCAATCACTCCTCACATCATGTGCTTGGGATCCAAGAATCAAAGGCTTGTCCTTCTATGAATCCACAGCAATCTTTCCAGCTTCTATTTTCCGTGATTTCATCTTGGACGTGAAAAAGCTCAGAGACTTAAACCCCGAACATTTTTGTGGGGTTGACAACTATAACGGTATTCTTATACGTTATATCAAAGGGTCGGATGCATATTCTAGAGCCAAAGAGGCATCAACTCCGCGATTAAACCAAGATATTTGGGAAGAATTGGAACAAATGGCGTTTTTTAAGTATGGGGCGAAGCCACATTGGGGTAAGAATAGGAACATTGCATTCTTGGGAGTGGATAAGAAGTACCCAAATTACAACAAGTTTATTGAAGCAAAACAACAATTGGATCCACAAAATGTGTTTTCTAGTAATTGGTCTGATGAAATATTGTTTGGGAAGGAATTTAGAGAAGAAGTGATGTGGGATGTGCTCTTGAGGTTATGCATATGTAGTGAACACAGACATTGTAGCCCACAAAACAATTATTTATGTAGCCAAGGACTTGTCTATAAGGATGCTAGGTACTTTAAGCAAAGTTATACCATGCATGACACTCAAAAATATAACTTCTTCAAAGTTTACTTCTTTCATTCATGGCTTCACTGGAAAAATTAA 1488 0.3757 MNDKAINFIHCALNEHDYMKISTCETAKEIWDKLQITYEGTDHVKESKVFMLVHEWENFKMKDEESIEEALERLSKIFNNLSMLGTKYNDKQIVTKVLTSLTPKWNSKKKEKAYISWENEDESDSDNDEVANLCLMASEEKVSDDNSTSFNLQDEYDALLEVTLRVEPSFKRSITYNFTSDVGLEDLYVDHANKYEFADITWYPSQHTAVYRYDSRVPLNTSGNASLMLRYFCRKNKKHAWEMLNSSSNIKQWHLFTGYPVIGYQSKMQTSGSCLYSQSLLTSCAWDPRIKGLSFYESTAIFPASIFRDFILDVKKLRDLNPEHFCGVDNYNGILIRYIKGSDAYSRAKEASTPRLNQDIWEELEQMAFFKYGAKPHWGKNRNIAFLGVDKKYPNYNKFIEAKQQLDPQNVFSSNWSDEILFGKEFREEVMWDVLLRLCICSEHRHCSPQNNYLCSQGLVYKDARYFKQSYTMHDTQKYNFFKVYFFHSWLHWKN* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3124 495 Pfam gag-polypeptide of LTR copia-type 2 110 - -
Amo06g3124 495 Pfam D-arabinono-1,4-lactone oxidase 354 418 IPR007173 GO:0003885|GO:0016020
Amo06g3124 495 PANTHER L-GULONOLACTONE OXIDASE 3 159 465 - -
Amo06g3124 495 PANTHER GULONOLACTONE OXIDASE 159 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3124 Amo-Chr6 98380724 98384753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3124 K00103 - gmx:100778616 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2882 20 129981770 129983038 Amo06g3124 06 98380724 98384753 PCT