Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3096 ATGATCTTCACCATGTTGGCCTTTAATTTTGTGGCAACATTGGGTGACACATATGAACAAATTTTGATCACGTTCAAAAGCTCCTTGTCCAATTCGGACATTGCTTTGAGTAATTGGGGCACGGAGCCAAATCTTTGTAAATGGAATGGTTTATTGTGTGACAAGAAAACACAATCATTTCATGGCTTGAGACTAGAGAATATGGGACTAAGTGGGAGAATTGATGTTGACACATTATTTGAGTTATCAAATTTGACAAGCTTCAGTGTCATAGGAAATAACTTTGAGGGTCCAATGCCTGAATTCAAGAAGATTGTGTGGTTAAGAGCTTTGTTTCTTTCTAATAACAAATTCTCCGGTGACATTGCTGATGATGCTTTTGAGGGTATGAAAAGATTGAAGAAGGTGTACTTGGAAGAGAATGAGTTGAGTGGTTATATTCCAAAGTCCATTGCTGAATTGCCTAAGCTTTTGGAATTGAACTTAAGTGGTAACAGTTTTGAAGGACAAATACCAGAGTTTCATCAAAAGAATCTCAGCTTTAATGTGTTTGATTTATCAAACAACCTATTGGAGGGTATCATACCCCAAAGCTTAAGCAACCAAGATCCAATCCGATTTGCTGGCAACATAAATCTATGTGGAAAGCCTATGAACAAGAGCTGCAACGCCGATCCTAACGTGACCTTTGACTCCCCTTCTCCTTCTCCAAATGCAAAGAACCGCCGCAATCTTATAATTGCTATCACGGTGGTGGCCGCGGTTGTGGTTGCTTCAATGCTAGGACTTCTTTTCATCTCCGGCCGCCGCGGATGGCCCACGAAATCAAGCAAGAGGCTAAAATCAACACCCCATAAGAATCACTCAGCCTACTATAGTGCACAATCATCAATTGATGTTAATAATAAGAAAGAAGAGAAGGGAGAGTTGAATTTTGTTGGGGAAGATAGAGAGAAAGCATTTGATTTGCAAGGGTTGCTTAGGGCTTCAGCTGAGGTACTTGGTAGTGGAAGTTTTGGTTGTACCTACAAAGCTATGGTTGTGAATAATAATAGTGGTAATGAAGAAGCAGTGGTTGTGAAAAGGTTTAGGCACATGAACAATGTTGGGAAACATGAGTTCTATGATCATATGAGAAGGCTTGGGAGTTTGTCACACCCTAATTTGCTCCCTCTTGTTGCATTCCACTATACAAGACAAGACAAGTTTTTGGTTTATGATTTTGGTCATAATCATAGCTTGGCTACTCATCTCCACGGTAGGAAAAATGGATGCATGCTAACTTGGCCAACTCGTTTAAAGATCATAAAAGGAGTGGCAAGGGGACTTGCATATCTCTACACACAATTTCCAAACCAAAAAGTCCCCCATGGCCATCTCAAATCCTCCAACGTCATCTTGGACGCGGCGTTCCAGCCGCGTCTAACGGAGTACGGCCTTGTCCCGGTGATGAACAAGAGCCATGCTCAGAAATTCATGGCAGCATATAAGTCTCCTGAGTCATCCGAGCGGACAACCGAGAAGACGGACGTGTGGTGTCTTGGCATCTTGATTCTAGAAGTGCTGACGGGGAAGTTCCCGGCGAACTATTTAAGGCATGGAGGGAAGGCTGAGAATAATGCTGACCTGGCAACTTGGGTGAACACGGTGGTGAGGGAAGAGTGGAGTGGAGAAGTGTTTGATGAGGGCATAATGGGAATTAAAAATGGTGAGGGTGAGATGTTGAAGCTTTTGAGGATTGGGATGTGTTGTTGTGAGTGGGATTTGGAGAGTAGGTGGGATTTGAAGGAGGCTTTGGCAAAGATTGAAGAGGTCAAGGACATTGGGGAAGATAATAATAATAATATTAATAATTCAAATTCTTATTCTTATGTTAGTGAAGGAGATTTGCATTCTAGGGCTACTACTTTCACTCAAGACGATTTCTCTTTCTCAATTATTGCTGCTACTTGA 1953 0.4188 MIFTMLAFNFVATLGDTYEQILITFKSSLSNSDIALSNWGTEPNLCKWNGLLCDKKTQSFHGLRLENMGLSGRIDVDTLFELSNLTSFSVIGNNFEGPMPEFKKIVWLRALFLSNNKFSGDIADDAFEGMKRLKKVYLEENELSGYIPKSIAELPKLLELNLSGNSFEGQIPEFHQKNLSFNVFDLSNNLLEGIIPQSLSNQDPIRFAGNINLCGKPMNKSCNADPNVTFDSPSPSPNAKNRRNLIIAITVVAAVVVASMLGLLFISGRRGWPTKSSKRLKSTPHKNHSAYYSAQSSIDVNNKKEEKGELNFVGEDREKAFDLQGLLRASAEVLGSGSFGCTYKAMVVNNNSGNEEAVVVKRFRHMNNVGKHEFYDHMRRLGSLSHPNLLPLVAFHYTRQDKFLVYDFGHNHSLATHLHGRKNGCMLTWPTRLKIIKGVARGLAYLYTQFPNQKVPHGHLKSSNVILDAAFQPRLTEYGLVPVMNKSHAQKFMAAYKSPESSERTTEKTDVWCLGILILEVLTGKFPANYLRHGGKAENNADLATWVNTVVREEWSGEVFDEGIMGIKNGEGEMLKLLRIGMCCCEWDLESRWDLKEALAKIEEVKDIGEDNNNNINNSNSYSYVSEGDLHSRATTFTQDDFSFSIIAAT* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3096 650 Gene3D Transferase(Phosphotransferase) domain 1 410 629 - -
Amo06g3096 650 Pfam Protein kinase domain 332 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g3096 650 ProSitePatterns Protein kinases ATP-binding region signature. 334 361 IPR017441 GO:0005524
Amo06g3096 650 Gene3D Phosphorylase Kinase; domain 1 294 408 - -
Amo06g3096 650 PANTHER LRR RECEPTOR-LIKE KINASE 3 612 - -
Amo06g3096 650 ProSiteProfiles Protein kinase domain profile. 328 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g3096 650 Pfam Leucine rich repeat 108 166 IPR001611 GO:0005515
Amo06g3096 650 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 612 - -
Amo06g3096 650 SUPERFAMILY Protein kinase-like (PK-like) 332 603 IPR011009 -
Amo06g3096 650 Gene3D Ribonuclease Inhibitor 14 105 IPR032675 -
Amo06g3096 650 Gene3D Ribonuclease Inhibitor 108 224 IPR032675 -
Amo06g3096 650 SUPERFAMILY L domain-like 39 201 - -
Amo06g3096 650 Pfam Leucine rich repeat N-terminal domain 20 54 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3096 Amo-Chr6 97910877 97913636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g3096 2 629 Receptor kinase-like Gene Family AT5G35390 44.018 1.82e-175 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo06g3096 Pkinase 1.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3096 - - aip:107648455 1243.41