Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3086 ATGGGACTAAGTGGGAGAATTGATGTTGACACATTATTTGAGTTATCAAATTTGACAAGCTTCAGTGTCATAGGAAATAACTTTGAGGGTCCAATGCCTGAATTCAAGAAGATTGTGTGGTTAAGAGCTTTGTTTCTTTCTAATAACAAATTCTCRGGTGACATTGCTYATGATGCTTTTGAYGGTATGAAAAGATTGAAGAAGGTGTACTTGGAAGAGAATGAGTTSAGTGGTTATATTCCAAAGTCCATTGCTGAATTGCCTAAGCTTTTGGAATTGAACTTAAGTGGTAACAGTTTTGAAGGACAAATACCAGAGTTTCATCAAAAGAATCTCAGCTTTAATGTGTTTGATTTATCAAACAACCTATTGGAGGGTATCATACCSCAAAGCTTAAGCAACCAAGATCCAATCCGGTTTGCTGGCAACATAAATCTATGTGGAAAGCCTATGAACAAGAGCTGCAARGCCGATCCTAACGTGACCTTTGACTCCCCTTCTCCTCTTTCTCCAAATGCAAAGAACCGCCGCAATCTTATAATTGCTATCACGGTGGTGGCCGCGGTTGTGGTTGCTTCAATGCTAGMACTTCTTTTCATCTCCGGCCGCCGCCGACGGCCTACGAAATCAAGCAAGAGGCTAAAATCAACACCCCATAAGAATGACTCAGCCTACTATAGTGCACAATCATCAATTGATGTTAATAATAAGAAAGAAGAGAAGGGAGAGTTGAATTTTGTTGGGGAAGATAGAGAGAAAGCATTTGATTTGCAAGGGTTGCTTAGGGCTTCAGCTGAGGTACTTGGTAGTGGAAGTTTTGGTTGTACCTACAAAGCTATGGTTGTGAATAATAATAGTGGTAATGAAGAAGCAGTGGTTGTGAAAAGGTTTAGGCACATGAACAATGTTGGGAAACATGAGTTCTATGATCATATGAGAAGGCTTGGGAGTTTGTCACACCCTAATTTGCTCCCTCTTGTTGCATTCCACTATACAAGACAAGACAAGTTTTTGGTTTATGATTTTGGTCATAATCATAGCTTGGCTACTCATCTCCACGGTAGGAAAAATGGATGCATGCTAACTTGGCCAACTCGTTTAAAGATCATAAAAGGAGTGGCAAGGGGACTTGCATATCTCTACACACAATTTCCAAACCAAAAAGTCCCCCATGGCCATCTCAAATCCTCCAACGTCATCRTSGACGCGGCGTTCCAGCCGCGTCTAACGGAGTATGGCCTTGTTCCGGTGATGAACAAGAGCCATGCTCAGAAATTCATGGCAGCATATAAGTCTCCTGAGTCATCCGASCGGACAACCGAGAAGACGGACGTGTGGTGTCTTGGCATCTTGATTCTAGAAGTGCTGACGGGGAAGTTCCCGGCGAACTATTTAAGGCATGGAGGGAAGGGTGAGAATAATGCTGACCTGGCAAGTTGGGTGAACACGGTGGTGAGGGAAGAGTGGAGTGGAGAAGTGTTTGATGAGGGCATAATGGGAATAAAAAATGGTGAGAGTGAGATGTTGAAGCTTTTGAGAATTGGGATGTGTTGTTGTGAGTGGGATTTGGAGAGTAGGTGGGATTTGAAGGAGGCTTTGGCAAAGATTGAAGAGGTGAAGGAGATTGGGGATAATAATGATTGTGAAGATGATAATAATAATATTAATAGTTCAAATTCTTATTCTTATGTTAGTGAAGGAGATTTGCATTCTAGGGCTACTACTTTCACTCATGACGATTTCTCTTTCTCAATTATTGCTGCTACTTGA 1770 0.4153 MGLSGRIDVDTLFELSNLTSFSVIGNNFEGPMPEFKKIVWLRALFLSNNKFSGDIAXDAFDGMKRLKKVYLEENEXSGYIPKSIAELPKLLELNLSGNSFEGQIPEFHQKNLSFNVFDLSNNLLEGIIPQSLSNQDPIRFAGNINLCGKPMNKSCKADPNVTFDSPSPLSPNAKNRRNLIIAITVVAAVVVASMLXLLFISGRRRRPTKSSKRLKSTPHKNDSAYYSAQSSIDVNNKKEEKGELNFVGEDREKAFDLQGLLRASAEVLGSGSFGCTYKAMVVNNNSGNEEAVVVKRFRHMNNVGKHEFYDHMRRLGSLSHPNLLPLVAFHYTRQDKFLVYDFGHNHSLATHLHGRKNGCMLTWPTRLKIIKGVARGLAYLYTQFPNQKVPHGHLKSSNVIXDAAFQPRLTEYGLVPVMNKSHAQKFMAAYKSPESSXRTTEKTDVWCLGILILEVLTGKFPANYLRHGGKGENNADLASWVNTVVREEWSGEVFDEGIMGIKNGESEMLKLLRIGMCCCEWDLESRWDLKEALAKIEEVKEIGDNNDCEDDNNNINSSNSYSYVSEGDLHSRATTFTHDDFSFSIIAAT* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3086 589 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 546 - -
Amo06g3086 589 Gene3D Transferase(Phosphotransferase) domain 1 344 564 - -
Amo06g3086 589 Pfam Leucine rich repeat 41 99 IPR001611 GO:0005515
Amo06g3086 589 ProSiteProfiles Protein kinase domain profile. 262 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g3086 589 SUPERFAMILY L domain-like 7 134 - -
Amo06g3086 589 MobiDBLite consensus disorder prediction 209 229 - -
Amo06g3086 589 Gene3D Ribonuclease Inhibitor 2 162 IPR032675 -
Amo06g3086 589 Pfam Protein kinase domain 265 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g3086 589 SUPERFAMILY Protein kinase-like (PK-like) 266 537 IPR011009 -
Amo06g3086 589 ProSitePatterns Protein kinases ATP-binding region signature. 268 295 IPR017441 GO:0005524
Amo06g3086 589 Gene3D Phosphorylase Kinase; domain 1 228 342 - -
Amo06g3086 589 PANTHER LRR RECEPTOR-LIKE KINASE 1 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3086 Amo-Chr6 97776602 97779378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g3086 3 568 Receptor kinase-like Gene Family AT5G35390 45.840 7.82e-164 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo06g3086 Pkinase 4.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3086 - - aip:107648455 1125.15