Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3085 ATGTGGTTGCAAAAGAATCATTGTGATAAGAAGGAGGGGGTGCATGGAGTAGTGGCAGTAGCAATAGATAATAGTAAGGGMAGCAGACATGCACTTCAATGGGCCACCGAACATCTCCTCACAAAATCTCAAACCGTTGTTCTTATTCATGTTAAGCTTAGGCCAACTTCTCTTTCTACATCACATTCTCTCTTGTCTCCAAGGATATTTGGCATTGGTGATGGCAAATTACCTTCTAAGGGCCTTGATGACCCGGGCAAAGAGATTTTTCATTCATATCATCTCTTCTGTGCACGCAAAGATATACGTTGCAAGGACATACTCCTAGAAGATGTAGATGTAGCGAAAGCATTAACAGAATATGCTTCCCAAACAATAATAGAGCATTTGGTGTTAGGGTYTTCAAGCAAATCTACTTTCCTTAGATTCAAGGTAGCAGATATTCCGGGATTAGTATCAAAAGGGGCACCAGATTTCTGTACAGTGTATGTGGTTTCAAAAGGAAAGATTCATTCAACACGATCAGCTTCTCGTCCTGCTCCTTCCCCTTCTCCTTTGCTTCCACACCTTACCCAATCCAATTCTAATTTAACCTCTGCTTCTGACCCACGTTTGCCTGCTAAACCCCATGAAAGACGATCCTTTGATGCACCTCGTAGATCACAAGAAGTAACGGATACAATSAGGTCGCCATTAACTCGGAAAGGTGTGAATGACAAGTCATATGCAGAAATGTCATGGTCAGATACTGACATAACATTTGTGAGCTCAGAAAGGTCGAGTATAGACCGSATGATTCCTTCGTTATACCTCGGCTCCGATGCAGGAATGTCGAATCCTCGATTATCATATGGCTCTGATATCAACATTGATGGAAACTACAGCTTTGAATCTGTTCATCATCCTAGGATGTCTATGGATAGTCTTGCCGACTCTCCTGAATTCTCATATGTTTCACATGATARTGATGGGGTCTTATCTTCCTCACATGCCACGGATGATGTAGAGAATGAAATGAGGAGATTGAAGTTGGAGTTGAAGCAAACCATGGAAATGTACAGCACAGCATGTAAAGAAGCTCTCACAGCAAAACAGAAGGCTATAGAACTTCAACGTTGGAAATTAGAAGAAGAGAGGAAATTAGAGGAGGCAAAGCTGGGAGAAGAAACTGCYTTAGCAATTGTAGAAATGGAGAAAGCTAAAGCAAAAGCAGCCATTGAAGCAGCTGAAGCACAAAAGAGGATTGCAGAACTAGAAGCACAAAAGAGACTTAATGCAGAAATGAAAGCAATCAAAGAAGCAGAAGCTAAGAAAAGAGCACTTGATGCTTTGGCACAAAATGARATCAGGTGTAGAAAGTACTCAATTGAGGAAATCGAAGCAGCAACAAATTTTTTTGCAACTTCCATGAAGATTGGAGAAGGRGGTTATGGTCCGGTCTTTAAATGCCTTCTTGATCATACACCTGTAGCAGTCAAGGTTCTGCGTCCTGATGCAGCACAAGGAAGGTCCCAGTTTCAAAGAGAGGTTGAGGTACTGAGTTGCATCCGGCATCCTAACATGGTACTCCTCTTAGGAGCTTGTCCGGAATACGGATGCCTTGTTTACGAGTACATGGCGAATGGAAGCTTAGAAGATKGACTCTTTTGTAGAGGAGACACTCCTCCACTCCCTTGGCAAATCAGGTTTAAAATAGCAGCTGAAATCGGCACRGGCCTGTTATTCCTCCATCAAACAAAACCAGAGCCTCTTGTCCACAGAGATTTGAAGCCGGCTAATATCCTGCTTGACCGAAACTGTGTTGCCAAGATCAGRGARGTAGGTCTTGCWAGGCTAGTCCCYCCMTCGGTCGCTGACTCGGTCACACAATACCATATGACATCTGCTGCTGGAACTTTTTGCTACATAGACCCTGAGTACCAACAAACAGGAATGTTAGGTGTAAAATCTGACATATACTCCCTTGGYATCATTTTTTTGCAAATTTTGACGGGGAAACCACCAATGGGATTGGCTCATCAAGTTGAGAAAGCCATTGAGAAGGGAACACTTGCCAATGTGCTTGATCCTAAYGTGCCTGATTGGCCAATGGATGAGGCTTTGAGCCTGGCAAAAATTTCGATCAAATGCGCCGAGCTAAGGCGAAAAGACAGACCGGATCTCGGCAAGGAAGTCCTACCAATACTAAATAGTCTAAGGTCATTGGCTGAAAATGGTGTTCTACATTTCAATGGCTATGTCAGCCCATCCAACCAGAGCCAAYTTTCTGTTCAGTTGGATGAAGCTTCTTCTCCTTCACTTGCTTYTTCTGAGGAGAGCCCAACGAAGCCATCCATTTCAAACCCTTAG 2349 0.4295 MWLQKNHCDKKEGVHGVVAVAIDNSKGSRHALQWATEHLLTKSQTVVLIHVKLRPTSLSTSHSLLSPRIFGIGDGKLPSKGLDDPGKEIFHSYHLFCARKDIRCKDILLEDVDVAKALTEYASQTIIEHLVLGXSSKSTFLRFKVADIPGLVSKGAPDFCTVYVVSKGKIHSTRSASRPAPSPSPLLPHLTQSNSNLTSASDPRLPAKPHERRSFDAPRRSQEVTDTXRSPLTRKGVNDKSYAEMSWSDTDITFVSSERSSIDRMIPSLYLGSDAGMSNPRLSYGSDINIDGNYSFESVHHPRMSMDSLADSPEFSYVSHDXDGVLSSSHATDDVENEMRRLKLELKQTMEMYSTACKEALTAKQKAIELQRWKLEEERKLEEAKLGEETALAIVEMEKAKAKAAIEAAEAQKRIAELEAQKRLNAEMKAIKEAEAKKRALDALAQNEIRCRKYSIEEIEAATNFFATSMKIGEGGYGPVFKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDXLFCRGDTPPLPWQIRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNCVAKIREVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTGKPPMGLAHQVEKAIEKGTLANVLDPNVPDWPMDEALSLAKISIKCAELRRKDRPDLGKEVLPILNSLRSLAENGVLHFNGYVSPSNQSQXSVQLDEASSPSLAXSEESPTKPSISNP* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3085 782 Gene3D Transferase(Phosphotransferase) domain 1 539 742 - -
Amo06g3085 782 MobiDBLite consensus disorder prediction 173 237 - -
Amo06g3085 782 Coils Coil 332 352 - -
Amo06g3085 782 ProSiteProfiles Protein kinase domain profile. 466 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g3085 782 Pfam Universal stress protein family 18 145 IPR006016 -
Amo06g3085 782 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 11 777 - -
Amo06g3085 782 Coils Coil 358 378 - -
Amo06g3085 782 Pfam Protein kinase domain 468 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g3085 782 PANTHER OS02G0152300 PROTEIN 11 777 - -
Amo06g3085 782 MobiDBLite consensus disorder prediction 205 223 - -
Amo06g3085 782 Gene3D Phosphorylase Kinase; domain 1 444 538 - -
Amo06g3085 782 Gene3D HUPs 17 165 IPR014729 -
Amo06g3085 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Amo06g3085 782 SUPERFAMILY Protein kinase-like (PK-like) 448 721 IPR011009 -
Amo06g3085 782 Coils Coil 392 444 - -
Amo06g3085 782 SMART serkin_6 466 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g3085 782 MobiDBLite consensus disorder prediction 187 202 - -
Amo06g3085 782 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 164 - -
Amo06g3085 782 CDD STK_N 17 168 - -
Amo06g3085 782 MobiDBLite consensus disorder prediction 749 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3085 Amo-Chr6 97771540 97775072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g3085 1 757 Receptor kinase-like Gene Family AT1G78940 55.974 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Amo06g3085 Pkinase 3.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3085 - - gmx:100779981 973.385