Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3054 ATGAGTACTCAGATTCTATTTTATCTTGTTCTGCAGCTCTTGGCTAGTAATTGTGATGCTCAACTTCGCCTCGATTATTACCGGAACACATGCCCGGATGTTGAATCCATAGTTCGCACCGCCGTCGAAACAAAACTTCAGCAGACATTTGTTACAGCACCGGGCACACTGAGGTTATTTTTCCACGACTGTTTTGTTCGGGGATGTGATGCTTCAGTGATGCTGGCATCAAGAAACAGCAGTGCAGAGAAGGATAACGGTATCAATCTGTCACTGGCTGGTGACGGTTTTGATACTGTCATCAAAGCCAAGGCTGCTGTGGATAGTGTCCCTCGCTGCCAAAATAAGGTTTCTTGTGCTGATATTTTGGCAATGGCTGCTAGGGACGTTGTTGCTTTGACAGGAGGACCATCTTATGCAGTTGAGTTAGGAAGGTTAGATGGGAGAATCAGTACAAAAGCTAGTGTGAGACACCATCTACCTCATGCTGATTTCACACTAACACAGCTTATTCAGATGTTTGCTTCAAATGGACTCACCCTTAGAGATCTTGTTGCATTATCAGGAGCACATACTATTGGTTTCTCTCACTGCAACCAATTCTCCAAAAGAATCTACAACTTCAGAACCAAGAACAGAATTGATCCAACATTGAATCCGGAATATGCGAAACAACTCCTGCAACTGTGTCCTAAAAGTGTTGACCCCAGAATTGCCATAGACATGGATCCAACTACACCTAGAACATTTGATAACCAGTACTACAAGAATCTCCAACAAGGAAAAGGGCTTCTTTCTTCTGACCAGACTTTGTTCACTGATAAAAGATCAAGAAAGCTAGTGAACTTGTTCGCCTCGAACGGCACAGAATTCGAACAGGCTTTTGTGGTTGCTATGAGGAAGCTTGGAAGGATAGGGATCAGAGCAGGGAACCAGGGAGAAATCAGGAGAGATTGCACTATGATTAACTAA 972 0.4362 MSTQILFYLVLQLLASNCDAQLRLDYYRNTCPDVESIVRTAVETKLQQTFVTAPGTLRLFFHDCFVRGCDASVMLASRNSSAEKDNGINLSLAGDGFDTVIKAKAAVDSVPRCQNKVSCADILAMAARDVVALTGGPSYAVELGRLDGRISTKASVRHHLPHADFTLTQLIQMFASNGLTLRDLVALSGAHTIGFSHCNQFSKRIYNFRTKNRIDPTLNPEYAKQLLQLCPKSVDPRIAIDMDPTTPRTFDNQYYKNLQQGKGLLSSDQTLFTDKRSRKLVNLFASNGTEFEQAFVVAMRKLGRIGIRAGNQGEIRRDCTMIN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3054 323 PANTHER PEROXIDASE 6 323 - -
Amo06g3054 323 Gene3D Peroxidase, domain 2 161 302 - -
Amo06g3054 323 CDD secretory_peroxidase 21 319 IPR033905 GO:0004601|GO:0042744
Amo06g3054 323 Pfam Peroxidase 39 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 Gene3D - 25 323 - -
Amo06g3054 323 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 SUPERFAMILY Heme-dependent peroxidases 21 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 ProSiteProfiles Plant heme peroxidase family profile. 21 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo06g3054 323 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Amo06g3054 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Amo06g3054 323 PANTHER - 6 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3054 Amo-Chr6 97185851 97188199 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g3054 20 323 Peroxidase AT4G30170 66.447 3.17e-152 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3054 K00430 - gmx:100793327 522.702