Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3046 ATGGCGACACCGCCACCGATGGGGCCACCGGGAAATCCAGTGTTTGACGGAGGACCGCCACCACCGCCGCCAACTCCAGGGACGGACATGACTGGAATATGCTTCAGAGACCAGCTTTGGCTAAACACCTACCCATTGGATCGGAACCTGGTGTTTGATTACTTTGCTTTGTCCCCCTTTTATGATTGGGGCTGCAACAATGAGCAGCTTCGAATGCGTTCTGTCCACCCCCTCGATATCTCACAACTATCGAAGATGACAGGGATAGAGTATATGCTCAGTGAAGTTTTGGAACCCCACCTTTTTGTAATTCGCAAACAAAAGAGAGATAGCCCTGAGAAAGTTACACCGATGCTGGCATACTACATCTTGGATGGTTCAATTTACCAGGCACCACAACTATGCAATGTTTTTGCTGCTCGAATTGGAAGGGCACTCTATTATATACAGAAAGCCTTTACTACAGCTGCCTCAAAGCTGGAGAAGATAGGACATGTTGATTCTGAAAATGAGACTGTGGTAACGGAATCAAAGGTTGCTAAGGAGACAATTGACTTGAAGGAAGTTAGGCGCGTGGATCAAATTCTTGCATCCCTGCAGCGCAAGAAGTCTTGCAATTCATGCATCAAAGTTGTTACCTTTTGTGGTAAATATACAAGCTTTACTCTAGAAGTTCAGACTTCAGAATATGTTGATAAATGTGAAGAACTACTACAGTTTTACCACATTCATCCCAGATTTTTTTTGTCTCTCATATGTGATTGTCAGTGTTAA 774 0.4432 MATPPPMGPPGNPVFDGGPPPPPPTPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWGCNNEQLRMRSVHPLDISQLSKMTGIEYMLSEVLEPHLFVIRKQKRDSPEKVTPMLAYYILDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGHVDSENETVVTESKVAKETIDLKEVRRVDQILASLQRKKSCNSCIKVVTFCGKYTSFTLEVQTSEYVDKCEELLQFYHIHPRFFLSLICDCQC* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3046 257 MobiDBLite consensus disorder prediction 1 28 - -
Amo06g3046 257 Pfam MED6 mediator sub complex component 33 158 IPR007018 GO:0003712|GO:0006357|GO:0016592
Amo06g3046 257 Gene3D Mediator complex, subunit Med6 27 156 IPR038566 -
Amo06g3046 257 PANTHER MED-6-RELATED 15 204 IPR007018 GO:0003712|GO:0006357|GO:0016592
Amo06g3046 257 MobiDBLite consensus disorder prediction 1 29 - -
Amo06g3046 257 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 15 204 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Amo06g3046 Med6 3.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3046 K15128 - gmx:100792248 330.487