Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3006 GTGGCCGCCACTGATCTTCCGGGTGGCACTCCAGCTAGCCTCCGACCTCGCAACTCAGACAACCTCCACCCTTTCTCGTGCTTCACGCTCAGAGGTGTTGAAAACTCCTGTTTCGCTCGACATGCTTGCCGCATATTTAATGGATTGGGAAAACCCATTGATAATGGTCCACTCATATTACCAGAGCCTTACTTGGACATATCAGGAAGTTCCATCAATCCTAGTGAGAGAACCTATCAAGAGGAGATGATACAAACCGGAATTTCTACAATTGATGTCATGAGTTCTATTGCTAGAGGTCAAAAGATCACTCTATTCTCAGCTGCTGGTCTCTCCCATGATGAGGATAATAACATGAGTATGATCATCTTGGGTACAAAGAGGTATATTACAAGTTTCATCACGGTCTCTAAGAGTTTATAA 423 0.4444 VAATDLPGGTPASLRPRNSDNLHPFSCFTLRGVENSCFARHACRIFNGLGKPIDNGPLILPEPYLDISGSSINPSERTYQEEMIQTGISTIDVMSSIARGQKITLFSAAGLSHDEDNNMSMIILGTKRYITSFITVSKSL* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3006 140 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 43 115 IPR022879 -
Amo06g3006 140 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 112 IPR027417 -
Amo06g3006 140 Gene3D - 31 136 - -
Amo06g3006 140 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 43 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3006 Amo-Chr6 96424773 96428331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g3006 20 115 Primary Pumps ATPases(2) AT4G38510 70.833 7.44e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3006 K02147 - adu:107485570 154.836