Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2987 ATGAAACCACTTGAAGGGATAAGTGATGATGTCAAAGGAAGACTTGCATGCTATAAAGAAGATTGGACAAAGGGATTTAAATCTGGCTTTAGGATATTTGCTCCAACTTTCTACATATTTTTTGCTTCTGCTATCCCCGTAATTGCTTTTGGGGAACAACTTAATAAGGAAACAAATGGGAGCTTGGGGATAGTGGAATCATTAATATCTACGGGGCTTTGTGGAATTATCCACTCAATATTTGGTGGTCAGCCATTGTTGATTGTTGGTGTTGCTGAACCCACCATTATAATGTATCATATTATGTTTCAGTTTTGCGCATCAAAACCAGATTTCGGTGCCAAACTCTTTTTGCCTTGGGCTGCTTGGGTTTGTGTGTGGACAGCATTATTTCTAATTGTGCTTGCAATTTTCAATGCATGCACAGATGGAGATGGAAACTCAGAAGATTCAAAATTCCAATGGAGATACATAAATGGCTTACTGGCTGTGATATTCTCTTTTGGGTTACTTCTGAGTGCGAAGCAAAGTAGAAAAGCAAGACATTGGCGATATGGGACAGGGTGGCTAAGAGCTTTAATAGCAGATTATGGGGTTCCATTGATGGTGGTGTTTTGGACTGCATTATCGTACACAAAACCAAGCAAAGTTCCATCTCGAGTTCCTCGCAGGTTGTTTTGTCCACTGCCCTGGCAATCTGAATCTCTCTACCACTGGACAGTAGTGAAGGACATGGGCAAGGTACCCATCTTTTATATTGTGGCGGCGGTTATACCTGCTCTCATGGTTGCTGCTTTATACTTTTTTGATCATAGTGTTGCTTCCAAGATGGCTCAGCAAAAGGAATTTAACCTTCAAAAACCTTCTGCTTACCACTATGATCTTTTCTTGCTTGGACTCATGACTCTACTTTGTGGTCTTCTTGGGCTTCCTCCATCAAATGGAGTCCTACCTCAATCACCAATGCATACAAAGAGTCTTGCAGTTCTTAATAGGCAGAAGACGGAGAAGAAAGCGAAAGAAGTGCTTAAGAAACAAGGCAGCCACGCAGAATTATTTGGCAGGATGCAATCTGTTATTATAGAAATGGATGCAGATCCTACTTTTAAAGAAATGGAGAAATTGAAAAAGGCAGTGATGAAATCTGAGGATGAGAAGGAAGGTGAAAAAAATGAAAGTTTTGATATGAAACAAATAGAGGAGCATCTACCTGTACGTGTTAATGAACAAAGGCTTAGCAACTTGTTGCAGTCTCTTATGGTTGGGTTATCAGTTTTGATGATCCCCATCATAAGAAAAATACCTACATCAGTTTTGTGGGGATATTTTGCTTTCATGGCCATTGATAGTCTCCCTGGCAATCAATTCTGGGAAAGGTTCTTGCTACTCTTTATCCCAAGAAATCGCCGCTACAAAATTTTGGAAGGTCCACATGCAAGTTTTGTGGAGCTGGTACCATTCAAGGTGACAGCATTATTCACAGGGTCGCAATTGGTGTATTTCTTGATTTGTTACGGGATGACGTGGATACCAACTGGAGGAATACTGTTCCCTTTGCCTTTCTTCCTTCTCATACTCATTAGAGAGCATCTCCTTCCTAAGTTCTTCAAAGCCCAACATCTTCATGAACTTGATGCTTCTGAGTACGAGGAAGTTGCTGGTGATCCTACTGATAACGAGCAGAGTAACACGGATGATGAGGATGATAAGTTAGGTTTGGGAGCAGAGATATTGGATGAGATGACTACTCACAGAGGAGAGTTGAAACATAGAACTCTAACAAGATTAGATAGAGAATCCCATTCTCATTCTCAAGAACCTCCTCATCAACAATAA 1836 0.4069 MKPLEGISDDVKGRLACYKEDWTKGFKSGFRIFAPTFYIFFASAIPVIAFGEQLNKETNGSLGIVESLISTGLCGIIHSIFGGQPLLIVGVAEPTIIMYHIMFQFCASKPDFGAKLFLPWAAWVCVWTALFLIVLAIFNACTDGDGNSEDSKFQWRYINGLLAVIFSFGLLLSAKQSRKARHWRYGTGWLRALIADYGVPLMVVFWTALSYTKPSKVPSRVPRRLFCPLPWQSESLYHWTVVKDMGKVPIFYIVAAVIPALMVAALYFFDHSVASKMAQQKEFNLQKPSAYHYDLFLLGLMTLLCGLLGLPPSNGVLPQSPMHTKSLAVLNRQKTEKKAKEVLKKQGSHAELFGRMQSVIIEMDADPTFKEMEKLKKAVMKSEDEKEGEKNESFDMKQIEEHLPVRVNEQRLSNLLQSLMVGLSVLMIPIIRKIPTSVLWGYFAFMAIDSLPGNQFWERFLLLFIPRNRRYKILEGPHASFVELVPFKVTALFTGSQLVYFLICYGMTWIPTGGILFPLPFFLLILIREHLLPKFFKAQHLHELDASEYEEVAGDPTDNEQSNTDDEDDKLGLGAEILDEMTTHRGELKHRTLTRLDRESHSHSQEPPHQQ* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2987 611 MobiDBLite consensus disorder prediction 566 611 - -
Amo06g2987 611 PANTHER ANION EXCHANGE PROTEIN 2 142 IPR003020 GO:0005452|GO:0006820|GO:0016020
Amo06g2987 611 PANTHER ANION EXCHANGE PROTEIN 145 603 IPR003020 GO:0005452|GO:0006820|GO:0016020
Amo06g2987 611 MobiDBLite consensus disorder prediction 551 611 - -
Amo06g2987 611 Pfam HCO3- transporter family 3 141 IPR011531 GO:0006820|GO:0016021
Amo06g2987 611 Pfam HCO3- transporter family 158 339 IPR011531 GO:0006820|GO:0016021
Amo06g2987 611 Pfam HCO3- transporter family 404 494 IPR011531 GO:0006820|GO:0016021
Amo06g2987 611 Gene3D Helical hairpin bin 14 56 - -
Amo06g2987 611 Coils Coil 372 392 - -
Amo06g2987 611 MobiDBLite consensus disorder prediction 551 565 - -
Amo06g2987 611 PANTHER BORON TRANSPORTER 6-RELATED 2 142 - -
Amo06g2987 611 PANTHER BORON TRANSPORTER 6-RELATED 145 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2987 Amo-Chr6 96060877 96064319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2987 3 606 Antiporters AT5G25430 59.332 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2987 K24194 - aip:107647497 953.74