LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo06g2975	GAGGATCATATTGGTGTTAATATAGTTGTGGGGGGAATGGGAGTGAAGGGCATGTTATTTGTTATTGTTGCCTTGGTCCTTGTAGAAGTAGAAGTAGAAGTAGTAGCTATAGATGATATTGACAGTACTCAAATAGCTCTTCATGGGTGCCAAAGGAATTGTGGAGATGTTCAAATTCCGTATCCATTTGGCATAGGAAAAACCGAAAACGGTACTACCTGTTTCTTAGACAAACCATTTAATCTTACTTGCAACAGTAGTAGTTCCAGTTTAACATCGGGCAATGTCCAAGTTATAAACATCAACATCTCCCAAGGTCAAGCAGATATGTTGATTTTTGTCTCCAAATATTGTTATAATAGTAGCTATGGTAACAACGCTGTAAGTAGCCAACCCAGCGGGCTCATAAGTAGTTCTTCTTTCACCATTTCGAGCAAAGACAACAAGTTCATAAGTGTTGGCTGCGATACTTACGGCTATCTTAATAGCTTCTACAACAACAATGCAGGTTATTCAACAGGGTGCTTAACAAGATGTTATGGCAACACTAAGGAAATCAAGGATGGAGATTGTTCCGGTATTGGGTGCTGTGAGGTGGATATTCCTCCCAAGATGAGATCGGTCTCAACTCAAGCAGGTACCTTTTTCAATTTCCAGGATTCTCTGGTCTTCAACAACTGTAGCTATTCCTTTGTTGTCAAGAATGGCAACTACACGTTTAAGAAGGCCCACTTAGGGAAACTATTACATGAGACGTTCCCTGTGGTGTTCAATTGGAGTGTTGGAAACGAGACATGTAAAGAATCTCAAAACAGAGGTACCAACATTTGCAAGGGAAATAGTATTTGTATGGATGCAGAAAGTGGATATGGTTACCGGTGTCAATGCCAGAAAGGTTTTGAAGGAAATCCATACCTTCATAATTGCACAGATATTGATGAATGTGAGACGGGACAACATTCATGTGCAAGTAAACATAATTGTCGCAATGAAATTGGATTCCACGGATGCTTTTGTCCTAACGGACAATCAGGAAATGGATCAACAATAGAAGGGTGCCACAAGAAAAATTTGCTTCCACAAATTGTGATTGGTGCAAGTGCAGGATTCATAGCTATTTTTGTGGGAACTTCTTTGCTATACTTAACACACCAAAAGAGAAAATTCATCAAACTTAAAGAGAAGTTTTTTAAGCAAAATGGTGGTCTTCTTTTGCTACAACAACTCTCTTCAAGAGAAGAATCCTCCCATACTATTCAAATTTTCACCGCCAAAGAATTGAAGAAGGCCACCAACAACTATGATGAGAACTTAATCATTGGCAGGGGAGGTTTCGGCACAGTTTTCAAAGGAGTTCTAGAGAATAACACAATTGTTGCTATCAAGAAGTCCAGAATAGTTGATGCTGACCAAGTTGATCAATTCATCCACGAGGTTATCGTTCTGTCCCAAGTTAACCACAGAAATGTGGTGAAGCTTTTGGGTTGTTGTTTAGAAACAGAAGTCCCTCTTCTTGTCTATGAGTTTGTAAGGAATGGCACACTTTTCGATTTCATCCATAATGAAAACAAGAGAAATCATTTCAATTGGGAAAATCGTCTCAGAATTGCAACAGAGACAGTCGGAGCTTTATCATATCTTCATTCATCTGCTTCCATTCCAATTGTCCACAGAGATGTTAAGAGTACTAACATTCTCTTAGACGAAGATTACACTGCCAAAGTCTCTGACTTTGGAGCTTCAAAATTTGTTCCATTGAATCAAAATACATTAGCTACAGTGGTGCAAGGAACTTTTGGTTACTTGGATCCAGAATACATGCAAACTTGCCAACTAACTGAAAAAAGTGATGTGTATAGCTTTGGTGTTGTGCTCGCTGAGCTTCTTACGGGAAAGAAACCTCTTATGTTTGAGAAGTCGGAAGAGAAAACAAATCTTGCTATGTACTTGACATCTTGCCTGGAAGAGGATCGCTTGTTTGAAGCTCTTCAAGTTGGAATCTTGAACGAAGAAAATAAACAAGAGATTGTGGAAGTTGCTATTGTTGCAGCAAAGTGTTTGAGACTTAAAGGCGAAGAAAGGCCAAGCATGAAGGAAGTGGCAATGGAATTAGAGGGAATAAGGTTAATGTCAAAGTCCCACTGGGTTAATAATGCAGACAAGAATTTTGAAGAGATCCAGCACTTGCTTCCAGTGTCATCATCGTCAGAAAAATATGAGCATGGTGATAGCAGCAGTGGCAGTCATCAAAATACCAAATATGATAGTATCATCAGGGATCAAGAAGTGCTAATTGCCTTGCCAAGTGGAAGGTGA	2316	0.3938	EDHIGVNIVVGGMGVKGMLFVIVALVLVEVEVEVVAIDDIDSTQIALHGCQRNCGDVQIPYPFGIGKTENGTTCFLDKPFNLTCNSSSSSLTSGNVQVININISQGQADMLIFVSKYCYNSSYGNNAVSSQPSGLISSSSFTISSKDNKFISVGCDTYGYLNSFYNNNAGYSTGCLTRCYGNTKEIKDGDCSGIGCCEVDIPPKMRSVSTQAGTFFNFQDSLVFNNCSYSFVVKNGNYTFKKAHLGKLLHETFPVVFNWSVGNETCKESQNRGTNICKGNSICMDAESGYGYRCQCQKGFEGNPYLHNCTDIDECETGQHSCASKHNCRNEIGFHGCFCPNGQSGNGSTIEGCHKKNLLPQIVIGASAGFIAIFVGTSLLYLTHQKRKFIKLKEKFFKQNGGLLLLQQLSSREESSHTIQIFTAKELKKATNNYDENLIIGRGGFGTVFKGVLENNTIVAIKKSRIVDADQVDQFIHEVIVLSQVNHRNVVKLLGCCLETEVPLLVYEFVRNGTLFDFIHNENKRNHFNWENRLRIATETVGALSYLHSSASIPIVHRDVKSTNILLDEDYTAKVSDFGASKFVPLNQNTLATVVQGTFGYLDPEYMQTCQLTEKSDVYSFGVVLAELLTGKKPLMFEKSEEKTNLAMYLTSCLEEDRLFEALQVGILNEENKQEIVEVAIVAAKCLRLKGEERPSMKEVAMELEGIRLMSKSHWVNNADKNFEEIQHLLPVSSSSEKYEHGDSSSGSHQNTKYDSIIRDQEVLIALPSGR*	772

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo06g2975	771	ProSiteProfiles	EGF-like domain profile.	311	349	IPR000742	-
	Amo06g2975	771	ProSiteProfiles	EGF-like domain profile.	269	310	IPR000742	-
	Amo06g2975	771	Pfam	Wall-associated receptor kinase galacturonan-binding	50	106	IPR025287	GO:0030247
	Amo06g2975	771	MobiDBLite	consensus disorder prediction	734	753	-	-
	Amo06g2975	771	CDD	STKc_IRAK	440	707	-	-
	Amo06g2975	771	Pfam	Calcium-binding EGF domain	311	346	IPR001881	GO:0005509
	Amo06g2975	771	Pfam	Protein kinase domain	436	700	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo06g2975	771	Gene3D	Phosphorylase Kinase; domain 1	406	509	-	-
	Amo06g2975	771	SUPERFAMILY	EGF/Laminin	311	346	-	-
	Amo06g2975	771	ProSiteProfiles	Protein kinase domain profile.	434	716	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo06g2975	771	SUPERFAMILY	Protein kinase-like (PK-like)	411	705	IPR011009	-
	Amo06g2975	771	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	555	567	IPR008271	GO:0004672\|GO:0006468
	Amo06g2975	771	Gene3D	Laminin	263	353	-	-
	Amo06g2975	771	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21	27	733	IPR045274	GO:0007166
	Amo06g2975	771	ProSitePatterns	EGF-like domain signature 2.	294	309	IPR000742	-
	Amo06g2975	771	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2	27	733	-	-
	Amo06g2975	771	ProSitePatterns	Protein kinases ATP-binding region signature.	440	463	IPR017441	GO:0005524
	Amo06g2975	771	SMART	serkin_6	434	707	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo06g2975	771	Gene3D	Transferase(Phosphotransferase) domain 1	510	729	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo06g2975	Amo-Chr6	95832873	95835809	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo06g2975	50	757	Receptor kinase-like Gene Family	AT1G21230	46.814	0.0	613

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK	Amo06g2975		Pkinase	3.1e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo06g2975	-		-	adu:107495457	902.894