Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2974 ATGGAACTAAAGGTCATGATGCTAATTGTTGCACTAGTCCCTCTTGGAGTTGTAGCTGCAAATCGTGACCATAATCAAGCTCTTGATGGGTGCCAAAGAGAGTGTGGAGGTGTTCAAATTCCATATCCATTTGGAATTGGAAAATCAAACACAACCGGCGAGAATTGTTCCATGGACGAACCATTCGAACTCACTTGCGAAGAACAAGATTCCATTTTGAAATCCGGAGATTTCCAAGTCACATCCATAAACATCACCAAAGGCCAAGTTGAAATGATGGCACCAGTTTCCAAATCTTGCAGAGACACAAGCAGTGACGAAACAACGTACCTCGTCACTTTTCCTTCTTTCACGGTTTCTAGAAACGACAACAAATTCGTTAGTGTCGGTTGCGACACTTTCGGCTACCTTAATAGCTCCTATGACGATGGTGGGAGAACATATTCAACTGGGTGTTTATCAAGATGCTATGGCAATATGTTTGATATCGTTGATGAAAGTTGTTCCGGATTCGGGTGTTGTCAGATGGATATTCCTCCTAACATGGTGAATATCTCTATCCAAGCAGCGAGCTTTGATAATTTCAAAGAATCTTTGAGTTTCAACAATTGCAGCTACTCTTTCGTTGTCAAAAATGGAAACTATACGTTTTATAAGGAGGATTTGAAGAAGCTGCGTTTTCATGATGTCGCTGTGATCTATGATTGGAGTGTTGGAAATGAAACATGCGAGGCTTCTAAAAACAGAGGTACCAATGCTTGCAAAAGAAATAGCGAGTGTGTGAGATCTAATGGCGCTGAAAATGGTTACCAATGTCGATGCAAGTTTGGTTTTGAGGGAAACCCATACCATCCTGATGACATTGATGAATGTAAGATAGGAAGACATGATTGCATAAGTGGTGATAACTGCCATAATATGAATGGAACATACCGATGTTTTTGTCCTAAGGGACAACATGGAAATGGAACAAGGGAAGGAAGGTGCCAAGAGAATAATACACTTCCCAAGTTTGTCATTGGTGGAGGTGCAGGATTCATTGCTCTTTTGGCGGTGATTTTCTTTCTATACTGGATGTATCAAAAAAGAAAACTCAGCAAACTAAAAGAGAAATTTTTCAAACAAAATGGTGGTTATATTCTGCTACAACAGATCTCTACAAGAGGAGAATCCTCTCAAACAGTTCAACTCTTTACAGAAGATGAACTGAAGAAGGCCACAAAGAACTATGATGATAAGCTAATCATCGGCAGAGGAGGATATGGCACAGTTTTCAAAGGAGTTTTAACGAATAACAGAATTGTCGCAATAAAAAAATCTAAAATAGTTGATGAAAGCCAAATCGAACAATTCATTAACGAGGTGGTTGTTCTGTCTCGAATCAATCATCGTAACGTAGTGAAACTTTTAGGTTGTTGTTTAGAGACAGAGGTTCCTTTATTAGTTTACGAATTTATTAACAATGGTACACTTTTCAATTTCATCCACAAGGGTAGAAATGCAAATAATTTAATTTGGGAGACTCGTTTGAGAATAGCAACAGAAGCAGCAGGAGCTTTATCATATTTGCACTCAGCAGCCTCAATTCCAATTATCCATAGAGATATCAAAAGTGCCAATATTCTATTAGATAGCACTTACACTGCTAAAGTATCTGATTTTGGAGCTTCAAGATTTGTTCCACAAGATCAAATTGCATTAGCCACCATGGTGCAAGGAACTATTGGATATTTGGACCCTGAGTACATGCAAACAAGCCAATTGACTGAGAAAAGTGATGTTTATAGTTTTGGAGTGGATGGAATTCTGAATGAGAAAAATGAGCAAGAGATCAAGGAGGTTGCTATTCTTGCTGCAAAATGTTTAAGCCTTAAAGGGGAAGATAGACCAAGTATGAAGGAAGTGGCAATGGAATTGGAAGGAATTAGGGTATTGCAAAAGCACCCTTGGAGCAATAATAATGGAGACAACAATCTAGGAGAAACTCAATGCTTGGTTCTTGATGAGTCTTCATCAAGAATACACATGCATAGTGAACGTTGTAGCCATCAAAATTATAGGTATGATAGTATCAATGATCAACTGTCAAGTTCCTTAGATGGAAGATGA 2109 0.386 MELKVMMLIVALVPLGVVAANRDHNQALDGCQRECGGVQIPYPFGIGKSNTTGENCSMDEPFELTCEEQDSILKSGDFQVTSINITKGQVEMMAPVSKSCRDTSSDETTYLVTFPSFTVSRNDNKFVSVGCDTFGYLNSSYDDGGRTYSTGCLSRCYGNMFDIVDESCSGFGCCQMDIPPNMVNISIQAASFDNFKESLSFNNCSYSFVVKNGNYTFYKEDLKKLRFHDVAVIYDWSVGNETCEASKNRGTNACKRNSECVRSNGAENGYQCRCKFGFEGNPYHPDDIDECKIGRHDCISGDNCHNMNGTYRCFCPKGQHGNGTREGRCQENNTLPKFVIGGGAGFIALLAVIFFLYWMYQKRKLSKLKEKFFKQNGGYILLQQISTRGESSQTVQLFTEDELKKATKNYDDKLIIGRGGYGTVFKGVLTNNRIVAIKKSKIVDESQIEQFINEVVVLSRINHRNVVKLLGCCLETEVPLLVYEFINNGTLFNFIHKGRNANNLIWETRLRIATEAAGALSYLHSAASIPIIHRDIKSANILLDSTYTAKVSDFGASRFVPQDQIALATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVDGILNEKNEQEIKEVAILAAKCLSLKGEDRPSMKEVAMELEGIRVLQKHPWSNNNGDNNLGETQCLVLDESSSRIHMHSERCSHQNYRYDSINDQLSSSLDGR* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2974 702 SUPERFAMILY Protein kinase-like (PK-like) 390 640 IPR011009 -
Amo06g2974 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Amo06g2974 702 Gene3D Laminin 291 329 - -
Amo06g2974 702 SUPERFAMILY EGF/Laminin 287 322 - -
Amo06g2974 702 ProSiteProfiles EGF-like domain profile. 287 330 IPR000742 -
Amo06g2974 702 SMART egf_5 242 292 IPR000742 -
Amo06g2974 702 SMART egf_5 297 330 IPR000742 -
Amo06g2974 702 Gene3D Laminin 240 290 - -
Amo06g2974 702 Pfam Calcium-binding EGF domain 287 329 IPR001881 GO:0005509
Amo06g2974 702 ProSiteProfiles Protein kinase domain profile. 410 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2974 702 ProSitePatterns Calcium-binding EGF-like domain signature. 287 313 IPR018097 GO:0005509
Amo06g2974 702 SMART egfca_6 287 330 IPR001881 GO:0005509
Amo06g2974 702 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Amo06g2974 702 Gene3D Phosphorylase Kinase; domain 1 380 485 - -
Amo06g2974 702 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 304 315 IPR000152 -
Amo06g2974 702 Gene3D Transferase(Phosphotransferase) domain 1 486 653 - -
Amo06g2974 702 CDD EGF_CA 287 321 - -
Amo06g2974 702 SMART serkin_6 410 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2974 702 Pfam Wall-associated receptor kinase galacturonan-binding 31 91 IPR025287 GO:0030247
Amo06g2974 702 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 12 599 - -
Amo06g2974 702 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 600 664 - -
Amo06g2974 702 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 599 IPR045274 GO:0007166
Amo06g2974 702 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 600 664 IPR045274 GO:0007166
Amo06g2974 702 Pfam Protein kinase domain 411 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2974 Amo-Chr6 95823195 95826246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2974 3 652 Receptor kinase-like Gene Family AT1G21230 43.989 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo06g2974 Pkinase 7.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2974 - - adu:107495457 837.41