Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2972 ATGGCAAAGAAGAAGAATCCCCACGTGTATATGGATGTTTCTATAGACGGAGATCCAGTTGAGAGGATGGTTTTTGAGCTCTTCTATGACATTGCTCCAAAGACTGCAGAAAATTTTCGTGCACTGTGTACAGGAGAAAAAGGAGTTAGCCCAAATACTGGGAAATCACTACACTACAAGGGTTCTTTCTTCCATTACATTCTGAAAGGCTCTATTGTGCGGGGTGGCGATTTTGTCAATCGAAACGGGACTGGTGGGGAAAGCATATATGGTTCAAAGTTTCCAGATGAGTCACCTAGGCTGAAGCATGATTCTTCGGGCCTTCTATCAATGGCAATTGCTGATCGCGAAACACTGGGTTCTCATTTTATCATCACTTTAAAAGCGGATCACCATCTTGATAGAAAGCATGTAGTCTTTGGCAAGCTTGTCCACGGGCATAATGTGTTGAAGAAAATTGAAGACACAGGTGATGAAGAAGGGCATCCAACTGTGACCGTTAAAATAATTAATTGTGGTGAATTCAATGACGATGGAAAGAAGATAAATAAATCTGAAGCCAATAGTCAAGAAGTGCAGCGTAAGGGAAAGCACAAAAAATCTTCAAGAGACCGAAGAAAAAGGAGAAAATACGACTCATCAGATTCTGAGAGTTCTGATTCGGACATGGAATCTTCGGAAAGTGATAGTGATTCTGAGTCGGATGGTTCTTCATCATCTTATATAAGTTCCTCTAGTGATGACAGGCGAAGGAAGAGAAAGAGGTCTTCGAGGAAGGATAAACATAGACGTGGAAAGCGAAGAGATAAACGCCGAGATAAGAGGCGCAGGAAGCGTGACAAGAAGTCAAAACGTAGATCGAAACGGGATTCTGGTAGTCTAACTGATTCGGATAGTGGAACTAAGAGTGGCAATAGCCCTGATAGCAGAAGTCAAGCTGATGGGAAAGATCTGAAGCATAAAGATCATGGGCAGAAAAATGCTGAAGATCAGTCTCCATTAAATGTGGAGAATGAATTGCCTCTTGCACATCGGAAAAAGCGGGAGGAACTGGATATGCCAGAGGAAGAATTTCCGAAGGAGAATGGAGCACGGCGCAGCAATGGCATAGGAACCAACCATCGATCTGACAGAAGTGAAGAAAGGCAGCCTGATGTGGTTGATGATCATCCAGGGAAATCTAGGAGTCGAAGCATGAGTCCTAAGCGAGCTGTGAGTAAGAGTATGAGTATTAGTCCCAGGGGTGGAAAAAGAAGCCCAAGCCCAAGTCCAAGTCCAGACAGGAGTTTGAGCAGAAGTCCAAGTCGTAGTAGAAGCCCTCCTGCTCCATCAAGGCGGAGTTTGAGCAGGAGTCCTGCTAGAAGCATAAGCAGAAGTCCTGTTAGAAGGACAAGCAGAAGTCCAGACCGAAGCATCATTAGAAGCCCAGTGAGGGGTAGGAAGGGGAGAAGTGTCAGCAGAAGCCCCATGAGAACTCGCAATCATAGAAGTATCAGTAGAAGCTCTGGGAGAATCCGTGATCGCAGTGTTAGTAGAAGTCCTGTGAGAGCCCGTGATCGCAGAAGTATCAGTAGAAGCCCTGTGAGAGCTCGTGATCGTGGAAGTGTCAGCCGAAGCCCTGTGAGATCCCATTCTCGCAGTCATCGGAGCAGGAGTTCTCCCAGACCACCATCAAGAAGAACAATCAGTAGGAGCCCTGTGCGAGTGTCAAGAAAGAGCATAAGCCGAAGTCCAGTTAGGTCCTCTGCCAGAAGCTTGAGTAGAAGCTCTGGGAGGGTTCCTTTGAGAAGCATTAGTAGAAGCCCTGTCAGAGCCCCAAGTAGAAGTGATCGCCGCAGCTATTCTAGGAGTCGCAGCCCTGTCCGTAGGACAAGGACACCTCGTGGTAGGAGCATTTCGAGAAGCGTCTCACCTGATGCTTCACCAAAGCGTATCAGAAGGGGAAGAGGTTTTAGTGAACGATATTCTTATGCCAGAAGGTATAGAACCCCTTCTCGTTCTCCTGTGAGGTCATACCGCTACAATGGAAGAAGTGACCGTGACAGATACACAAGTTATAGGAGGTATTCCCCCAGGCGATACAGGAGCCCACCACCACGTGCAAGATCTCCTCCAAGATACCGAGGCAGGAGGAGCAGGACACCTTTATCATGCAGCCCTCGTTATCGCAGTCGAAGATATAGCAGAAGCCGTAGCCCTGTTCGTAGCCGTTCACCAGTTGAACCATATCGAGCTCGTGTCTCTCCTCGTGCAGAGAGGCGCATGTCCTCATCTCGGAGCAGGAGTCCGTCACGATCGAGGTCTTCTGTAGAATCACAATCTCCACGAAAAGCAAGCGGAGTCAACAGGTCAAGGTCGTCATCCGGAAGCCCAAATGGAAAGAAAGGCCTAGTCTCGTATGAAGATGGTTCTCCTGACTCAAGCCCGAGGTAA 2433 0.4751 MAKKKNPHVYMDVSIDGDPVERMVFELFYDIAPKTAENFRALCTGEKGVSPNTGKSLHYKGSFFHYILKGSIVRGGDFVNRNGTGGESIYGSKFPDESPRLKHDSSGLLSMAIADRETLGSHFIITLKADHHLDRKHVVFGKLVHGHNVLKKIEDTGDEEGHPTVTVKIINCGEFNDDGKKINKSEANSQEVQRKGKHKKSSRDRRKRRKYDSSDSESSDSDMESSESDSDSESDGSSSSYISSSSDDRRRKRKRSSRKDKHRRGKRRDKRRDKRRRKRDKKSKRRSKRDSGSLTDSDSGTKSGNSPDSRSQADGKDLKHKDHGQKNAEDQSPLNVENELPLAHRKKREELDMPEEEFPKENGARRSNGIGTNHRSDRSEERQPDVVDDHPGKSRSRSMSPKRAVSKSMSISPRGGKRSPSPSPSPDRSLSRSPSRSRSPPAPSRRSLSRSPARSISRSPVRRTSRSPDRSIIRSPVRGRKGRSVSRSPMRTRNHRSISRSSGRIRDRSVSRSPVRARDRRSISRSPVRARDRGSVSRSPVRSHSRSHRSRSSPRPPSRRTISRSPVRVSRKSISRSPVRSSARSLSRSSGRVPLRSISRSPVRAPSRSDRRSYSRSRSPVRRTRTPRGRSISRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYTSYRRYSPRRYRSPPPRARSPPRYRGRRSRTPLSCSPRYRSRRYSRSRSPVRSRSPVEPYRARVSPRAERRMSSSRSRSPSRSRSSVESQSPRKASGVNRSRSSSGSPNGKKGLVSYEDGSPDSSPR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2972 810 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Amo06g2972 810 MobiDBLite consensus disorder prediction 176 197 - -
Amo06g2972 810 MobiDBLite consensus disorder prediction 673 688 - -
Amo06g2972 810 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Amo06g2972 810 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Amo06g2972 810 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Amo06g2972 810 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Amo06g2972 810 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Amo06g2972 810 MobiDBLite consensus disorder prediction 340 363 - -
Amo06g2972 810 Gene3D - 1 176 IPR029000 -
Amo06g2972 810 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 384 - -
Amo06g2972 810 SUPERFAMILY Cyclophilin-like 4 178 IPR029000 -
Amo06g2972 810 MobiDBLite consensus disorder prediction 296 311 - -
Amo06g2972 810 MobiDBLite consensus disorder prediction 556 596 - -
Amo06g2972 810 MobiDBLite consensus disorder prediction 640 660 - -
Amo06g2972 810 MobiDBLite consensus disorder prediction 371 396 - -
Amo06g2972 810 MobiDBLite consensus disorder prediction 176 810 - -
Amo06g2972 810 MobiDBLite consensus disorder prediction 480 499 - -
Amo06g2972 810 MobiDBLite consensus disorder prediction 399 462 - -
Amo06g2972 810 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 1 384 - -
Amo06g2972 810 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Amo06g2972 810 MobiDBLite consensus disorder prediction 500 539 - -
Amo06g2972 810 MobiDBLite consensus disorder prediction 312 328 - -
Amo06g2972 810 MobiDBLite consensus disorder prediction 251 286 - -
Amo06g2972 810 MobiDBLite consensus disorder prediction 761 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2972 Amo-Chr6 95783130 95791412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2972 25 175 U-box Gene Family AT5G67530 38.562 1.54e-19 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2972 K09566 - han:110884615 399.823