Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2963 ATGGATGATTCAACTTCAGATTCTCAGCTGAACCAGAGCGAAGTAGATTTTAAAACTGAATCCAATGAAGTTCCTGAGATCTTCTGTGCAGTTGATGACCAGTTTATCCCTAAGGTTGGGATGACTTTTAAAACCCTTGACGATGCTGCAAAATTCTACAAGGATTATTCAAAGGTTGCAGGTTTTTCTACAAGAGTTCGGTGCACAAATAAGAAGGAAAACGAAATTAAGAATCAATTGATTACATGTACTAGAGAGGAAAAATGGAAATCAAAAATATCTCCGACTGAGAAGACAAATCCCTCAGCTGGTTTAAATTGTCCTGCAAGAATTTATATACACATATTGAAGGATGTTGGTATTTGGATCATTTCGAAGGTCGTGTTGCATCATTCACATCCTTACTGTCTAGATCAAGCAAGATGCTCAAACAGCATAGGGAACTAA 447 0.3714 MDDSTSDSQLNQSEVDFKTESNEVPEIFCAVDDQFIPKVGMTFKTLDDAAKFYKDYSKVAGFSTRVRCTNKKENEIKNQLITCTREEKWKSKISPTEKTNPSAGLNCPARIYIHILKDVGIWIISKVVLHHSHPYCLDQARCSNSIGN* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2963 148 Pfam FAR1 DNA-binding domain 51 134 IPR004330 -
Amo06g2963 148 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2963 Amo-Chr6 95728834 95729604 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo06g2963 FAR1 3.9e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2963 - - aip:110262592 235.343