Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2959 ATGGGAGTGAAGGGAATGTTATTTATTATTGTTGCCTTGGTCCTTGTAGAAGTGGAAGTAGAAGTAGTAGCTATAGATGATATTGATAGTACTCAAATAGCCCTTGATGGGTGCCGAAGGAAGTGTGGAGATGTTCAAATTCCATATCCATTTGGTGTAGGAAAAACCGTAAACGGTACTACCTGTTTCTTAGAGAAATCATTTAATCTTACTTGCAACAGTAGTAGTTCTAGTTTAACATCGGGCAATGTCCATGTCATAAACATAAACATCTCCCAAGGTCAAGCAGATATGTTGATTTTTGTCTCCAAATATTGTTATGATAATATCTATGGTAACACCAGTGTAATTAGCCTACCCCATAGGCTCACAAGTAGTCCTTCTTTCACCATTTCCAGCAAAGACAACAAGTTCATAAGTGTTGGCTGCGATACTTACGGCTATCTTAATAGCTTCTACAACAATTCAAATTATTCGACGGGATGCTTAACAAGATGTTATGGCAACACTATGGAAATCAAGGATGGAGATTGTTCCGGCATCGGGTGCTGTGAGGTGGATATTCCTCCTAGAATGAGAAACGTCTCTACTCAAGTAGGTACCTTTCAGAATTTTCAAAGTTCTTTGGCCTTCAACAACTGTAGCTATTCCTTTGTTGTCAAGAATGACAACTACACGTTTTCCAAGGCTCACTTGGAGAATCTACCATATGAGATGCTTCCTGTGGTGTTCAATTGGAGTGTTGGAAACAAAACATGTAAAGAATCTTTCAACAGAGGTACCAACACTTGCAAGGGAAATAGTATTTGTTTGGATGCAAAGAGTGGACATGGTTACCGGTGTCAATGCAAGCAAGGTTTTGAAGGAAATCCATATCATCCGCATGGTTGCATAGACATTGATGAATGCAACACAAGACAACATTCATGTGTAAGTGACCATAATTGTCACAATACAAATGGATCCTACATATGCTTATGTCCTAAGGGGCAATCTGGAAATGGTATCAAGGAAGATGGTTGCCACAAGAAGAATTTCCTTCCACATATTTTCATTGGGACTAGTGCAGGATTTATAGCTATTTTGGTGGGGACTTGTTTGTTATACCTAACGTATCAAAAGAGAAAACTCATCAAACTAAAAGAGAAGTTTTTTGAGCAGAACGGTGGTCTTATTTTGCTACAACAAGGAGAAGAGTCCTCCCATACTAAAATTTTCACCGCTGACAAATTGAAGAAAGCCACCAACAACTATGATGAGAATTTAATCATTGGCAGAGGAGGTTATGGCACAATTTTTAAAGGAGTTCTGGAGAATAAAACAATTGTTGCTATTAAGAAGTCCAAAATAGTTGATCCTGACCAAGTTGTGCAATTCATAAATGAGGTGATTGTTTTGTCCCAAATTAACCATAGAAATGTGGTGAAGCTTTTGGGTTGTTGTTTAGAAACAGAAGTCCCTCTACTAGTTTATGAGTTTGTAAGCAATGGCACACTCTTTGATTTTATCCATAATGAAAACAAGAGAAATAATTTCAATTGGGAAAATCGTCTCAGAATCGCAACAGAGACAGCAGGAGCTTTATCATATCTTCACTCAGCTGCTTCCATACCAATTGTCCACAGAGATGTTAAGAGCGCCAACATTCTCTTAGACGAAGATTACACTGCCAAAGTCTCTGATTTTGGAGCTTCTAGATTTGTTCCATTGGATCAAACTGCACTAGCTACAATGGTGCAAGGAACTTTTGGTTATTTGGATCCAGAATACATGCAAACTAGCCAACTAACCGAGAAAAGTGATGTGTATAGCTTTGGTGTTGTGCTCGCGGAGCTTCTTACAGGAAAGAAACCTTTTTCATTTGAGAAGTCGGAAGAGAAGACAAATCTTGCTAAGTACTTCTTATCTTGCGTGAAAGAGGATTGCTTGTTGGAGGCTCTTCAAGTTGGAATACTGAATGAAGGAAATAAGCAGGAGATTGTGGAAGTTGCTATTATTGCAACAAAGTGTTTGAGACTTACAGGGGAAGAAAGACCAAGTATGAAGGAAGTGGCAATGGAATTGGAGGGAATAAGGCTAATGTCAAAGCATCAGTGGGTTAATAATGGAGACAAGAATTTTGAAGAGATCCAACACTTACTTCCTATATCATCATCGTCAGAAAGATATGAACATGGTGATAGCAGTAGTGGTCATCAAACTACACAATATGATAGCATCATGAAGGATCAAGAAGTGCTAATTGCCTTACCAAGTGGAAGATGA 2265 0.3854 MGVKGMLFIIVALVLVEVEVEVVAIDDIDSTQIALDGCRRKCGDVQIPYPFGVGKTVNGTTCFLEKSFNLTCNSSSSSLTSGNVHVININISQGQADMLIFVSKYCYDNIYGNTSVISLPHRLTSSPSFTISSKDNKFISVGCDTYGYLNSFYNNSNYSTGCLTRCYGNTMEIKDGDCSGIGCCEVDIPPRMRNVSTQVGTFQNFQSSLAFNNCSYSFVVKNDNYTFSKAHLENLPYEMLPVVFNWSVGNKTCKESFNRGTNTCKGNSICLDAKSGHGYRCQCKQGFEGNPYHPHGCIDIDECNTRQHSCVSDHNCHNTNGSYICLCPKGQSGNGIKEDGCHKKNFLPHIFIGTSAGFIAILVGTCLLYLTYQKRKLIKLKEKFFEQNGGLILLQQGEESSHTKIFTADKLKKATNNYDENLIIGRGGYGTIFKGVLENKTIVAIKKSKIVDPDQVVQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLFDFIHNENKRNNFNWENRLRIATETAGALSYLHSAASIPIVHRDVKSANILLDEDYTAKVSDFGASRFVPLDQTALATMVQGTFGYLDPEYMQTSQLTEKSDVYSFGVVLAELLTGKKPFSFEKSEEKTNLAKYFLSCVKEDCLLEALQVGILNEGNKQEIVEVAIIATKCLRLTGEERPSMKEVAMELEGIRLMSKHQWVNNGDKNFEEIQHLLPISSSSERYEHGDSSSGHQTTQYDSIMKDQEVLIALPSGR* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2959 754 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 18 717 - -
Amo06g2959 754 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 717 IPR045274 GO:0007166
Amo06g2959 754 Pfam Calcium-binding EGF domain 299 339 IPR001881 GO:0005509
Amo06g2959 754 SMART egf_5 252 298 IPR000742 -
Amo06g2959 754 SMART egf_5 302 342 IPR000742 -
Amo06g2959 754 CDD STKc_IRAK 424 691 - -
Amo06g2959 754 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 316 327 IPR000152 -
Amo06g2959 754 ProSiteProfiles Protein kinase domain profile. 418 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2959 754 ProSiteProfiles EGF-like domain profile. 256 290 IPR000742 -
Amo06g2959 754 CDD EGF_CA 299 333 - -
Amo06g2959 754 SUPERFAMILY EGF/Laminin 299 334 - -
Amo06g2959 754 SMART egfca_6 299 342 IPR001881 GO:0005509
Amo06g2959 754 Gene3D Transferase(Phosphotransferase) domain 1 494 712 - -
Amo06g2959 754 Pfam Protein kinase domain 420 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2959 754 SUPERFAMILY Protein kinase-like (PK-like) 400 689 IPR011009 -
Amo06g2959 754 Gene3D Phosphorylase Kinase; domain 1 393 493 - -
Amo06g2959 754 Gene3D Laminin 251 341 - -
Amo06g2959 754 ProSitePatterns Protein kinases ATP-binding region signature. 424 447 IPR017441 GO:0005524
Amo06g2959 754 ProSitePatterns Calcium-binding EGF-like domain signature. 299 325 IPR018097 GO:0005509
Amo06g2959 754 SMART serkin_6 418 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2959 754 Pfam Wall-associated receptor kinase galacturonan-binding 38 93 IPR025287 GO:0030247
Amo06g2959 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Amo06g2959 754 ProSiteProfiles EGF-like domain profile. 299 342 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2959 Amo-Chr6 95690654 95693723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2959 36 740 Receptor kinase-like Gene Family AT1G21230 48.481 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo06g2959 Pkinase 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2959 - - adu:107495457 925.62