Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2938 ATGACTTCAGCGTTCTCTGGAGTAGCAGTGGCGCAAGGTCCAAAACTTCTTCTGAGGAGCCTCAGATTCTGCTCGAACTCGCACGCTAGCGTGAGAAATTGCCGTCCGTTCGCGATGGATTCTTCTTCTGTTAGGGTTTCTTCTTCCAATGGTGGCGGTGGCGACGGCGAGGTTCGGTTTCCGTTGTCATCGGCGGCGTCGGGCGCTCTGATCATTCAGAAGGGAGATATCACGAAGTGGTCCATTGATGGTTCCACTGATGCAATAGTGAATCCTGCCAATGAGAGAATGCTTGGAGGTGGTGGAGCTGACGGAGCTATACATAGAGCTGCAGGCCCAGAACTTGTTCAAGCTTGCCTCAAGGTTCCAGAAGTCAGGCCTGGAATCCGCTGCCCAACAGGGGAAGCAAGGATCACGCCAGGTTTCAAGCTTCCAGCTTCTCATGTTATTCATACCGTTGGACCAATTTACCATGCAGATAATAATCCAGCTGCCTCTCTGGCGAATGCGTACAGAAATAGCTTGAAGGTTGCAAAAGAGAACAGCATTCAGTATATAGCATTCCCAGCCATATCATGTGGTGTCTATGGCTACCCTTACGATGAAGCTGCTACGGTGGCTATTTCTTCCATAAAAGAGTTTCCAAATGACTTTAAAGAGGTCCACTTTGTTCTGTTTTTGCCTGAAATTTATGACACTTGGGTAAACAAGGCAAAGGAGTTGCTGAAAGAGTAA 735 0.4844 MTSAFSGVAVAQGPKLLLRSLRFCSNSHASVRNCRPFAMDSSSVRVSSSNGGGGDGEVRFPLSSAASGALIIQKGDITKWSIDGSTDAIVNPANERMLGGGGADGAIHRAAGPELVQACLKVPEVRPGIRCPTGEARITPGFKLPASHVIHTVGPIYHADNNPAASLANAYRNSLKVAKENSIQYIAFPAISCGVYGYPYDEAATVAISSIKEFPNDFKEVHFVLFLPEIYDTWVNKAKELLKE* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2938 244 Pfam Macro domain 90 207 IPR002589 -
Amo06g2938 244 SUPERFAMILY Macro domain-like 69 240 IPR043472 -
Amo06g2938 244 CDD Macro_OAADPr_deacetylase 70 239 - -
Amo06g2938 244 PANTHER MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 49 243 - -
Amo06g2938 244 Gene3D Leucine Aminopeptidase, subunit E, domain 1 47 244 IPR043472 -
Amo06g2938 244 ProSiteProfiles Macro domain profile. 57 242 IPR002589 -
Amo06g2938 244 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 49 243 - -
Amo06g2938 244 SMART YBR022w_8 69 207 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2938 Amo-Chr6 95268756 95272424 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2938 75 180 C2H2 Transcription Factor Family AT5G01310 35.294 1.25e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2938 K23518 - gmx:100811169 341.658