Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2914 ATGGGGAAAAAAGGAGGCTGGTTTTCGTCAGTAAAGAAAGTTTTCAAGTCCTCGTCGTCGTCATCCTCTTCTTCTAATAAGAATTTGTTGCCGGCTCCGCGCCTGCAAAAAGGGAAGAAACAGCAGCACCAAGTACCAGCAGCAGCAGAAGTTGTGCCTTTTGAGCGGTTTCAAGCAGAGACTTCACCAAATGTGATAATTGAGGAGACTGCCACGTCATCAGCGTCTGGGGCTGAAGACAGGAATCATGCTATTGCGGTTGCGGCAGCAACTGCAGCGGCTGCGGAGGCAGCGGTTGCGGCTGCTCAGGCTGCCGCTAGAGTTGTGAGACTGGCGGGTTATGGGCGGCATTATTCCAAGGAAGAGAGAGCGGCAACAGTGATTCAGTCATACTACAGGGGCTACCTGGCTCGACGCGCTTTGCGTGCATTAAAGGGACTTGTGAGGTTGCAAGCGCTGGTGAGGGGACACAATGTGCGGAAGCAAGCTCAGATGACAATGCGGTGTATGCAAGCATTAGTGAGGGTGCAAGCACGAGTGAGAGCTCGCAGGATTCAGCTCAATCATGAGAAGCATCTTCATCATCATGAAGSAGATGATGATATTGATGATGAGCAAWAAGTACAAGTTCATCCGAAGCAAGTTGCCAATAATAATAAGCCTATCATGATGAGCCRCATGAGAAATAGTGATGGTTGGGACAATAGGCATCAAAGTAGCKACAAGGTTAGGGAAAATGATTTGAGGAAACATGATACTGCAATGAAGAGGGAGAGAGCTCTTGCTTATGCTTTCAACTCCCAGCAGCAACCACATAATCAATACATGCAAACAGCTCCAAATAGTGATGATATGGGAACTTATTATCCCAATGAGCGGGAAAAAGCCCAATGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCTCAACCGCACAATGTTAAGCACCTGAGCCCACGTGAGACCCCTTATATGAATCTTGCTTCAACAACCTCAACCACAACAGATAACATGTCTGAGAAAACCGTAGAAATGGACAAGATTGCAACTCCAGGCCCAAGTAATAATCTCAACATGGGCCCAATGAACCAAGACTTTGTTGACCAAAGCCCAATTCTAAGTAGACAACATCAAAGACCTCCAAGCCCAAATAGACCCAGCTATATGGCACCAACTCAGTCTGCAAAGGCCAAGGTTCGGGATCAAGGCCCAAGCAAGCCACGGGCCTCACCTGGGCCACAATGGAACTCATCGACAAAGGGAGGTTCTGTTACTGGTTCAGGCTGTGACTCGTCTAGCTCCGGTGGAACAACAAGTTACCAATATATCAGGAGCCCAAGCCCAAAGATTAATGGGTTTCGTCCTCAATCTAGAAGGATAGTTAGCAGCAACCCAGATTACATTGAAGACTGGGCCATTCAACTTGGAACTCATGGTTGGGCATAG 1446 0.4793 MGKKGGWFSSVKKVFKSSSSSSSSSNKNLLPAPRLQKGKKQQHQVPAAAEVVPFERFQAETSPNVIIEETATSSASGAEDRNHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYGRHYSKEERAATVIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRIQLNHEKHLHHHEXDDDIDDEQXVQVHPKQVANNNKPIMMSXMRNSDGWDNRHQSSXKVRENDLRKHDTAMKRERALAYAFNSQQQPHNQYMQTAPNSDDMGTYYPNEREKAQWGWNWLERWMSSQPHNVKHLSPRETPYMNLASTTSTTTDNMSEKTVEMDKIATPGPSNNLNMGPMNQDFVDQSPILSRQHQRPPSPNRPSYMAPTQSAKAKVRDQGPSKPRASPGPQWNSSTKGGSVTGSGCDSSSSGGTTSYQYIRSPSPKINGFRPQSRRIVSSNPDYIEDWAIQLGTHGWA* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2914 481 Pfam IQ calmodulin-binding motif 148 163 IPR000048 GO:0005515
Amo06g2914 481 Pfam IQ calmodulin-binding motif 122 142 IPR000048 GO:0005515
Amo06g2914 481 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Amo06g2914 481 PANTHER IQ-DOMAIN 5-RELATED 1 453 - -
Amo06g2914 481 MobiDBLite consensus disorder prediction 17 31 - -
Amo06g2914 481 MobiDBLite consensus disorder prediction 349 391 - -
Amo06g2914 481 PANTHER IQ-DOMAIN 21 1 453 - -
Amo06g2914 481 MobiDBLite consensus disorder prediction 347 457 - -
Amo06g2914 481 MobiDBLite consensus disorder prediction 409 457 - -
Amo06g2914 481 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Amo06g2914 481 SMART iq_5 120 142 IPR000048 GO:0005515
Amo06g2914 481 SMART iq_5 143 164 IPR000048 GO:0005515
Amo06g2914 481 MobiDBLite consensus disorder prediction 17 45 - -
Amo06g2914 481 Gene3D - 121 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2914 Amo-Chr6 94951415 94956022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2914 1 449 IQD Protein Family AT3G49260 48.319 7.93e-90 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2914 - - adu:107495204 785.793