Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2894 ATGGAGATTATCAACAACAACAATAACAATGGAATTTCAAGAGATGGAATCCTAAGGAGTAATAGCTCCAACACATGGAGGAACAATAGCATGGATGCTTTCTCTTCGTCCGAACGGCGCGAAGACGACGAAGAAGCTCTAAAATGGGCCGCAATTGAGAGGCTTCCGACGTATTTGCGCATTCGGAGAAGCATGATAAACAATTCGGAGGTTGACATCAAGCACATGGGATTAACGGAGAGGAAGATTCTTCTTGAGAGGCTTGTCAAGATTGCTGAAGAAGATAATGAGAAGTTCTTGTTGAAACTAAGAGAAAGGATGGAAAGAGTTGGACTTGATATTCCAACAATTGAAGTGAGGTTCGAGCACATAAATGTGGAAGCACAAGTTTATGTTGGAAGAAGAGCATTGCCTACACTATTCAACTTCTATGTGAATGTTTTAGAGGGGTTCTTCAATTATCTCCACATCATTCCAAGTCCAAAGAAGCCTTTACACATCCTTCAAAATGTTAGTGGAATCATAAGGCCCAGAAGAATGACTCTGTTGTTGGGACCCCCAAGCTCAGGGAAGACCACATTGCTATTAGCCTTAGCTGGAAAACTTGGCAAAGATTTAAAAAAATCAGGGAGAGTAACATACAATGGGCATGGGGTAGAAGAGTTTGTGGCACAGAGAAGTTCAGCGTATATTGGGCAACATGATAATCACATTGGTGAAATGACTGTTAGAGAAACCCTTGCTTTCTCTGCTAGATGCCAAGGGGTTGGACACAACTATGAGATGCTGAGTGAACTTTTGAGAAGGGAGAAGGAAGCCAAGATTAAACCAGACACTGATGTTGATGCTTATATGAAGGCAGCAGCACTAGAAGGACAACAAACTAGTGTGGTCACTGACTACATTCTTAAGATCTTAGGGCTTGAAGTTTGTGCTGACATTATGGTAGGAGATGGAATGATAAGAGGAATTTCAGGAGGTCAGAAAAAGAGAGTCACTACAGGCGAAATGCTTGTTGGACCTATAAAAGTGTTGTTCATGGATGAAATATCAACTGGATTGGATAGTTCGACAACTTTTCAGATAATGAATTCGATTCGGGAATCGATTCATATTCTGAACGGAACAGCACTTGTGTCTTTGTTACAGCCAGCACCAGAAACTTATGAATTGTTTGATGATATAATACTTCTAACGGATGGACAAATTGTGTATCAAGGGCCAAGACAAAATGTGCTTGAGTTCTTTGAATCAATGGGATTCAAGTGTCCTCAAAGAAAAGGAGTTGCTGATTTCTTACAAGAGGTGACATCAAGAAAAGATCAATGGCAATATTGGGCSCTCAAGGATGAACCATACAACTTTGTAACTGTCAAGGATTTTGCTGAAGGCTTCCAATTATTCCACATTGGTCAAAARCTTGGAGATGARTTGGCCASTCCTTTTGACAAGTCAAAGAGCCATCCAAGTGCATTGACCACAAAAAAGTATGGTGTAAACAAGAAAGAGCTTCTCAAGGCTTGTGCTAGCAGAGAATTCTTGCTTATGAAACGAAATTCCTTTGTCTACATCTTCAAAGCMATACAATTAGTTTATTTAGCAGTCATGACAACAACACTATTTCTAAGACCAAAGATGCACCGAGATTCTGTGTTGGATGGAGGAACTTACTTGGGTGCACTTTTCTTCACAATCACAGTGGCAATGTTCAATGGAATTGCAGAACTAAACATGACCATAATGAAACTCCCTGTGTTCTACAAGCAAAGGGACCTTCTCTTCTACCCTGCATGGGCCTATTCTATTCCTCCATGGATTCTCAAGATTCCAATTACACTTGTTGAAGTTTTCCTTTGGGAAGCAATTTGTTACTATTCTATTGGTTTTGATCCAAATTTTGGAAGGGTTTTGAARCAGTTCTTGGTAATCTTCTGCATCAATCAGATGGCGTCTTCGCTGTTTCGGTTGATGGCAGGACTTGGAAGGGATGTTATAGTTGCTAACACTGTTGGTTCATTTGCATTGCTCATAGTTTTGGTCTTGGGAGGATTTGTCATTTCAAGAGAGGATGTGCACAAATGGTTCTTATGGGGCTACTGGTCCTCACCACTGATGTATGCCCAGAATGCCATTGCTGTTAATGAGTTTCTTGGCCATAGTTGGAGAAAGGTTCTTCCTGGTACCAATGAAACTCTGGGAGTATTGGTACTCAAATCTCGTGGACTATTCACAGAATCGTATTGGTTTTGGTTAGGAATAGGAGCTTTGATTGGTTATGTTTTCCTCTTCAATTTTCTCTTCACCTTGGCTTTGCAATACCTCAGTCCATTGAGAAAGAATCAAGCAGGATTGTCCCAAGAGAAATTGCTGGAAAGGAATGCTTCCACTCGCGAAGAGGCCGTTCAATTATCGACACGAAAAAGCACCACAGAAGCTAAGGTTATAGAAGAAGCAAGCATTTCATCCAGGTCACTTTCTGGAAGAGTTGGTGATTATAATAATAATAATAGTAATGGCAGAAGTGGAAGGAGGGGCATGGTTCTTCCCTTTCAACCTCTTTCCCTAACTTTTGATGAGATAAGATATTCTGTAGACATGCCACAGGAAATGAAAAATCAAGGGGTTTTCGAAGATCGTCTAGAACTTTTGAAGGGTGTTAGCGGCGCTTTTAGGCCGGGAGTACTAACAGCTTTGATGGGGGTAAGTGGAGCCGGCAAGACTACTCTGATGGATGTTTTGGCCGGAAGGAAAACCGGTGGATATATAGAAGGAAGCATCACAATCTCTGGTTATCCTAAGAATCAAGAAACGTTTGCTCGAATATCCGGATACTGCGAACAATTTGATATCCACTCACCTTATGTGACAGTCTATGAATCTTTGATGTATTCAGCATGGCTTCGTTTACCCCASGAAGTTGATCCTTCAACAAGAAAGATGTTCATTGAGGAAGTTATGGAGCTTGTGGAGCTTAACTCATTGAGAGAAGCACTTGTTGGATTGCCGGGGGAGACAGGACTTTCGACCGAGCAAAGAAAACGGCTAACAATTGCAGTTGAGCTTGTAGCCAACCCATCAATAATATTCATGGATGAACCAACCTCTGGCCTTGATGCCAGAGCAGCTGCAATTGTAATGAGAACTGTGAGGAACACGGTCGACACAGGCCGGACCGTGGTTTGCACCATTCACCAGCCTAGTATTGACATATTTGATGCCTTTGATGAGCTGTTACTCTTAAAATTGGGAGGGGAACAAATATATGCCGGCCCATTAGGCCGCCATTGCTCACAATTGATTCAATACTTTGAGGGTATTGAAGGAGTTCCTAAGATCAAAGATGGTTATAACCCTGCAACATGGATGTTGGAAGTTACATCAGCAGTAACAGAAGCAAATCTTAATGTCAACTTCACTGATGTGTACAGAAGCTCAGAACTACACCGGAGAAATAAACAACTGATCCAAGAACTTAGTATACCTGTACAAGGTTCACAAGATCTATACTTTGATACTCAGTATTCACAGAACTTTCTAACACAATGCAAAGCATGCCTATGGAAACAACATTTATCATATTGGAGGAACACATCTTATACAGCAGTTAGACTGCTATTCACAGCAATTATAGCTCTAGTATTTGGGGTCATCTTTTGGGACATTGGCTTTAAAAGGAGAAAGGAGCAAGATCTTTTTAATGCAATGGGATCAATGTATGCTGCTGTTACCTTCATTGGGGTGCAAAATGGTGCCTCAGTGCAACCTATGATAGCAGTTGAGAGAACAGTCTTCTACAGAGAAAGAGCTGCTGGAATGTATTCAGCTTTGCCATATGCTCTTGCACAGGTTATTATTGAACTTCCGCATATCTTGGTTGAGGCTCTTGTTTATGGGGTTATAGTGTATGCAATGATGGGGTTTGATTGGACAGCATCAAAGTTCTTGTGGTATCTATTCTTCATGTACTTCACATTCTTATATTACACCTTTTATGGGATGATGACAATGGCGATAAGTCCCAACCCTCATGTTGCTGGTATATTGTCCGGTGGATTCTATGCAATATGGAGCCTTTTCTCAGGCTTCATCATTCCCTTATCGAGAATACCCATATGGTGGAAGTGGTGCTATTGGATATGCCCTGTTGCATGGACACTGAATGGATTGGTGACTTCACAATATGGAGACAACATGGACAAACTTGAAAATGGTCAAAGGATTAAGGATTTTGTGGAGAGTTACTTTGGATTTCACCATGACTTTCTTGGAGTTGTTGCAATTGTGGTGGCTGCTTTCTCACTCTTATTTGCACTCATTTTTGCATTTGGCATCAAAGTATTCAACTTCCAAAAAAGATGA 4359 0.41 MEIINNNNNNGISRDGILRSNSSNTWRNNSMDAFSSSERREDDEEALKWAAIERLPTYLRIRRSMINNSEVDIKHMGLTERKILLERLVKIAEEDNEKFLLKLRERMERVGLDIPTIEVRFEHINVEAQVYVGRRALPTLFNFYVNVLEGFFNYLHIIPSPKKPLHILQNVSGIIRPRRMTLLLGPPSSGKTTLLLALAGKLGKDLKKSGRVTYNGHGVEEFVAQRSSAYIGQHDNHIGEMTVRETLAFSARCQGVGHNYEMLSELLRREKEAKIKPDTDVDAYMKAAALEGQQTSVVTDYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPIKVLFMDEISTGLDSSTTFQIMNSIRESIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRQNVLEFFESMGFKCPQRKGVADFLQEVTSRKDQWQYWALKDEPYNFVTVKDFAEGFQLFHIGQKLGDELAXPFDKSKSHPSALTTKKYGVNKKELLKACASREFLLMKRNSFVYIFKAIQLVYLAVMTTTLFLRPKMHRDSVLDGGTYLGALFFTITVAMFNGIAELNMTIMKLPVFYKQRDLLFYPAWAYSIPPWILKIPITLVEVFLWEAICYYSIGFDPNFGRVLKQFLVIFCINQMASSLFRLMAGLGRDVIVANTVGSFALLIVLVLGGFVISREDVHKWFLWGYWSSPLMYAQNAIAVNEFLGHSWRKVLPGTNETLGVLVLKSRGLFTESYWFWLGIGALIGYVFLFNFLFTLALQYLSPLRKNQAGLSQEKLLERNASTREEAVQLSTRKSTTEAKVIEEASISSRSLSGRVGDYNNNNSNGRSGRRGMVLPFQPLSLTFDEIRYSVDMPQEMKNQGVFEDRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSITISGYPKNQETFARISGYCEQFDIHSPYVTVYESLMYSAWLRLPXEVDPSTRKMFIEEVMELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPLGRHCSQLIQYFEGIEGVPKIKDGYNPATWMLEVTSAVTEANLNVNFTDVYRSSELHRRNKQLIQELSIPVQGSQDLYFDTQYSQNFLTQCKACLWKQHLSYWRNTSYTAVRLLFTAIIALVFGVIFWDIGFKRRKEQDLFNAMGSMYAAVTFIGVQNGASVQPMIAVERTVFYRERAAGMYSALPYALAQVIIELPHILVEALVYGVIVYAMMGFDWTASKFLWYLFFMYFTFLYYTFYGMMTMAISPNPHVAGILSGGFYAIWSLFSGFIIPLSRIPIWWKWCYWICPVAWTLNGLVTSQYGDNMDKLENGQRIKDFVESYFGFHHDFLGVVAIVVAAFSLLFALIFAFGIKVFNFQKR* 1453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2894 1452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 425 IPR027417 -
Amo06g2894 1452 CDD ABCG_PDR_domain2 852 1090 IPR034003 -
Amo06g2894 1452 Pfam ABC transporter 168 350 IPR003439 GO:0005524
Amo06g2894 1452 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 855 1107 IPR003439 GO:0005524
Amo06g2894 1452 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 14 1452 - -
Amo06g2894 1452 Pfam ABC-2 type transporter 504 716 IPR013525 GO:0016020|GO:0140359
Amo06g2894 1452 Pfam ABC-2 type transporter 1180 1393 IPR013525 GO:0016020|GO:0140359
Amo06g2894 1452 Pfam ABC transporter 883 1035 IPR003439 GO:0005524
Amo06g2894 1452 Pfam Plant PDR ABC transporter associated 721 782 IPR013581 -
Amo06g2894 1452 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 425 IPR003439 GO:0005524
Amo06g2894 1452 Gene3D - 153 454 IPR027417 -
Amo06g2894 1452 SMART AAA_5 892 1084 IPR003593 -
Amo06g2894 1452 SMART AAA_5 177 402 IPR003593 -
Amo06g2894 1452 Pfam ABC-transporter N-terminal 73 143 IPR029481 -
Amo06g2894 1452 PANTHER ATP-BINDING CASSETTE TRANSPORTER 14 1452 - -
Amo06g2894 1452 Gene3D - 869 1102 IPR027417 -
Amo06g2894 1452 Pfam ABC-2 type transporter 383 434 IPR043926 GO:0140359
Amo06g2894 1452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 871 1091 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2894 Amo-Chr6 94530551 94539597 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g2894 06 94530551 94539597 Amo08g2056 08 33260757 33270213 PCT
Amo06g2894 06 94530551 94539597 Amo18g3395 18 136118388 136128667 PCT