Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2893 ATGACCTTTTCGGTTCTTGATAGATGCATGGAGAAAAACCACATTAGGATGGTGTACTATTACCAAAGTTCATCAACATCATTAGGGGAGGGAGAATTTGGTAAAATGACAAAGAATTTAAAAGAAACATTGTCAGAGATGCTAAACTATTATCCAATGAATGTGGATAGTGAAAAGGAACACATGCTTGTGTATTGGGAGGACATGTATCATAAGCCTTATTATTGGTCAACTTTTTATGTCCAGATAACTGAATTTGAAGAAGGAGGATTAGCAATTGGCCTAAGTTGTTTTCATCTTCTAGCAGATTACACTAGTGCAACCAACTTCTTGAAGGCTTGGTCTGATATTTCATTAGGCAACAAAATTACTGTTCTTCCATTATTCCAYCCTTTACCTTCAACAAGAAAAAGAATTTCCAATCACCACCCATATTTTGAATTAATCAACCACTATAAATCCTCAATTGAGAGACCCATTCCAATAAAAGAAGAAAAGTACACTATTATATCACTGGGCTTCTCACACCAAATGGTTAATGCTTGCATTTCTAAGGCCCAATTTAATGGTCCATCAGGCCCAATAACAATGACTCCTTTTGAAGCGTTAGCAGGCCTGTTTTGGGCTTCAATTAGCAACATCAAGGGATTACAAAATGGGCTCATTGACATGTCTATATGTTTAGATGCAAGAAAAGTGTTGGGCCTGGACTATGGATTCTTTGGGAACACAATGATATATAATAAGGTCCATTCCAATGGTAATTTAGAAGGTAACATATTTGTACAAGCTACAAGGTATATAGGAGAAGTTGTAGCAAAAATGGACAATGAGGGAATAATGGACCTAATTGAGTGGCTTGAAAAAAATGAGATGAATTCACCAAAAATGATCAACGGTCCTGATTTGATTTGTGTTAGCTTGGAAAATGTAGACCCATATTTGAGTGTGTTTCAAGATTGGTTGAAACCACTTAGGGTTTCATGTTACATAGAGCCAGTTTTGGGTGAAGGACAGGTTTTGATCCTCCCAGGAACACCAGAGGAGGGTCCTTTAAGCAGGGTGGTTATGGTGACACTTAAGGAAGATGAGGCAATTAAGCTTTTTGAAGATGATCTCATCTCCCAATTCTCTCCAACTATCTTCATGAAATGTTAA 1158 0.3705 MTFSVLDRCMEKNHIRMVYYYQSSSTSLGEGEFGKMTKNLKETLSEMLNYYPMNVDSEKEHMLVYWEDMYHKPYYWSTFYVQITEFEEGGLAIGLSCFHLLADYTSATNFLKAWSDISLGNKITVLPLFHPLPSTRKRISNHHPYFELINHYKSSIERPIPIKEEKYTIISLGFSHQMVNACISKAQFNGPSGPITMTPFEALAGLFWASISNIKGLQNGLIDMSICLDARKVLGLDYGFFGNTMIYNKVHSNGNLEGNIFVQATRYIGEVVAKMDNEGIMDLIEWLEKNEMNSPKMINGPDLICVSLENVDPYLSVFQDWLKPLRVSCYIEPVLGEGQVLILPGTPEEGPLSRVVMVTLKEDEAIKLFEDDLISQFSPTIFMKC* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2893 385 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 54 384 - -
Amo06g2893 385 Pfam Transferase family 43 371 - -
Amo06g2893 385 Gene3D - 52 147 IPR023213 -
Amo06g2893 385 Gene3D - 153 371 IPR023213 -
Amo06g2893 385 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 53 - -
Amo06g2893 385 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 54 384 - -
Amo06g2893 385 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2893 Amo-Chr6 94514573 94518073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2893 81 370 Monolignol Biosynthesis Gene Families AT5G48930 24.756 1.07e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2893 - - cam:101505678 499.59