Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2882 AAACGCAATTCTCCCAAATTCTCTCGTTCAACCCCAAATTCACACCATTCTTCGCTGCTGTGGTCGCTCCGTCATGGTTGTGCCGCCGTCGCATTCTGTTGCTGCCGTGTCACTATCGCTCCTCACATTCACGCCACCGTCGCTCCTCTTCCTCGCGCTGCCGTGATAAGCAAGAAAAAGATAATGGGAACGTCGCTGGTTTCGAACGTAAAGCGCGAGGTTTCGATCATGAGCAAGCTCAACCACCCAAACATCGTGAAGCTGCACGAGGTGCTGGCGACAAAGACCAAGATCTATTTCGTGTTGGAGTTCGTTAAAGGCGGTGAGTTATTTGCTAAGGTTTCGAAAGGGAGGTTCAGCGAGGATCTCGCTCGCAAGTATTTCCAGCAGCTTATCTCCGCCGTAGGGTACTGCCCTCGCGCGGCGTTTTTCACCGTGATTTGA 444 0.5225 KRNSPKFSRSTPNSHHSSLLWSLRHGCAAVAFCCCRVTIAPHIHATVAPLPRAAVISKKKIMGTSLVSNVKREVSIMSKLNHPNIVKLHEVLATKTKIYFVLEFVKGGELFAKVSKGRFSEDLARKYFQQLISAVGYCPRAAFFTVI* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2882 147 Gene3D Transferase(Phosphotransferase) domain 1 52 143 - -
Amo06g2882 147 PANTHER - 54 142 - -
Amo06g2882 147 ProSiteProfiles Protein kinase domain profile. 17 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2882 147 Pfam Protein kinase domain 60 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2882 147 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 54 142 - -
Amo06g2882 147 SUPERFAMILY Protein kinase-like (PK-like) 58 139 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2882 Amo-Chr6 94351343 94352012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2882 55 144 CBL-interacting serine-threonine protein kinases AT5G01820 64.444 3.88e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo06g2882 Pkinase 4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2882 - - aip:110270608 147.902