Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2874 ATGGGAGTGAAGGGTATGTTGTTATTTGTTATTGTTGCCTTGGTCCTTGTAGAAGTAGAAGTAGTAGCTATAGATAATACTGATGGTACTCAAATAGCCCTTGATGGGTGCCAAAGAAAGTGTGGAGATGTTCAAATTTCATATCCATTTGGCATAGGAAATTCAAATGTAACCCATGCTACCTGTTTCTTGGAAAAATCATTTGAACTTACTTGCAATAGTAGTACTTCCACTTTAATATGGGGAACCAATATCCCAGTCAAATCCATAAACATCTCCGGAGGTCAAGCAGATATGTTGATTTTTGTCTCTGTAAATTGTTATAGCAATGACTCTGGTAACACCATTACATATAGCCCACTCCACAACCTCACAAGTATTCCTTCTTTCACCATTTCTAGCAAAGACAACAAATTCATAAGTGTTGGCTGCGATACTTTTGGCTATCTTAATAGCTTCTACGACAACAATACAGGTTATTCAACGGGGTGTTTAACAAGATGTTATGGCAACAATGTGGAAATCAAGGACGGAGATTGTTCCGGCATCGGGTGCTGTCAGGTGGATATTCCTCCTGGAATGAGAAAGGTATCTACCCTAGTAGGTACCTTTGAGAATTTCAACAGTTCTTTGACTTTCAACAACTGTAGCTATTCCTTTGTTGTCAAAAATGGCGACTACAAGTTTTTGAAGAAACACTTGGTGAATCTAACATATGAGAGGCTCCCTGTGGTATTCGATTGGACTGTTGGGGACGGGACATGTGAAGGAGGTACCAACGCTTGCAAGGGAAATAGTAGATGTGTGAACTCAGACACTGGATATGGTTACCGGTGTCAATGCAATCCAGGTTATGAAGGAAATCCATACCATCCACATGGTTGCACAGACATTAATGAATGTGATACGGAAAATCATACATGTCTAAGTAAACATAATTGTCTCAATTTAATTGGATCCCACAAATGTTTTTGTCCTAAGGGACAATCAGGAAATGGTACCAAGGAAGATGGTTGCCACAAGAAAAATTTCCTTCCTCATATTGTCATTGGTGCAAGTGCAGGATTCATAACTATGCTGGTGGGGACTTGTTTGCTATACTTAACGTATCAAAAGAGAAAATTTATTAAGCTAAAAGAGAAGTTTTTTAAACAAAACGGTGGTCTTATTTTGCTACAAAAAGAAGAAGAGTCCTCCCATACTAAAATTTTCACCGCGAGCAAATTGAAAAAAGCAACCAACAACTATGACGAGAAGTTAATCATTGGTAGGGGAGGTTATGGCACGGTTTTCAAAGGAGTTCTAGAGAATAACACAATTGTTGCTATTAAAAAGTCTAAAGTAGTTGATGCTGATCAATTACAAGTTGAACAATTCATAAATGAGGTGATTGTTTTGTCCCAAATTAACCACAGAAATGTGGTGAAACTTTTGGGTTGTTGTTTAGAAACAGAAGTCCCTCTGTTGGTCTATGAGTTTGTAAGCAATGGCACACTCTTCGATTTCATCCATAATGAAAACAAGAGAAATCATTTCAATTGGGAAAATCGTCTCAGGATCGCAGCAGAGGCGGCTGGAGCTTTATCATATCTTCACTCATCTGCTTCCATTCCAATTGTCCACAGAGATGTTAAGAGCGCCAATATTCTCTTAGACGAAGATTACACTGCAAAAGTCTCAGACTTTGGAGCTTCAAGATTTGTTTCAGTGGATCAAAATGCATTAGCTACAGTGGTGCAAGGAACTATTGGTTACTTGGATCCGGAATACATGCAGACTAACCAACTAACTGAAAAAAGTGATGTGTATAGCTTTGGTGTTGTGCTTGCTGAACTTCTTACAGGAAAAAAACCTTTTTCATTTGTGAAGTTGGAAGAGAAGACCAATCTTGTTACGTACTTTCTATCTTGCCTGAAAGAGGATTGCTTGTTTGAGGCTCTTCAAGTTGGAATCTTGAATGAAGGAAACAAGCAGGAGATTGTGGAAGTTGCTATTGTTGCAGCAAAGTGTTTGAGACTTAAAGGGGAAGAAAGACCAAGCATGAAGGAAGTGGCAATGGAATTGGAAGGAATAAGGCTAATGTCAAAGTGCCACTGGATTAATAACAGAGACAAGAATTTTGAAGAGATCCAACATTTGCTTCCGATGTCATCATCGTCAGAAAAATATGAGCATGGTGATAGCAGTAGTGGTAGTCATCAAAATACCAAATATGATAGTATCATCAAGGATCAAGAAGTGCTAATTGCCTTACCAAGTGGAAGATGA 2268 0.3858 MGVKGMLLFVIVALVLVEVEVVAIDNTDGTQIALDGCQRKCGDVQISYPFGIGNSNVTHATCFLEKSFELTCNSSTSTLIWGTNIPVKSINISGGQADMLIFVSVNCYSNDSGNTITYSPLHNLTSIPSFTISSKDNKFISVGCDTFGYLNSFYDNNTGYSTGCLTRCYGNNVEIKDGDCSGIGCCQVDIPPGMRKVSTLVGTFENFNSSLTFNNCSYSFVVKNGDYKFLKKHLVNLTYERLPVVFDWTVGDGTCEGGTNACKGNSRCVNSDTGYGYRCQCNPGYEGNPYHPHGCTDINECDTENHTCLSKHNCLNLIGSHKCFCPKGQSGNGTKEDGCHKKNFLPHIVIGASAGFITMLVGTCLLYLTYQKRKFIKLKEKFFKQNGGLILLQKEEESSHTKIFTASKLKKATNNYDEKLIIGRGGYGTVFKGVLENNTIVAIKKSKVVDADQLQVEQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLFDFIHNENKRNHFNWENRLRIAAEAAGALSYLHSSASIPIVHRDVKSANILLDEDYTAKVSDFGASRFVSVDQNALATVVQGTIGYLDPEYMQTNQLTEKSDVYSFGVVLAELLTGKKPFSFVKLEEKTNLVTYFLSCLKEDCLFEALQVGILNEGNKQEIVEVAIVAAKCLRLKGEERPSMKEVAMELEGIRLMSKCHWINNRDKNFEEIQHLLPMSSSSEKYEHGDSSSGSHQNTKYDSIIKDQEVLIALPSGR* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2874 755 CDD STKc_IRAK 422 691 - -
Amo06g2874 755 Gene3D Laminin 301 339 - -
Amo06g2874 755 Pfam Protein kinase domain 417 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2874 755 Gene3D Phosphorylase Kinase; domain 1 383 493 - -
Amo06g2874 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 17 717 - -
Amo06g2874 755 PIRSF SRK 56 741 IPR024171 GO:0004674
Amo06g2874 755 Pfam Calcium-binding EGF domain 297 339 IPR001881 GO:0005509
Amo06g2874 755 SMART egf_5 300 340 IPR000742 -
Amo06g2874 755 SMART egf_5 254 296 IPR000742 -
Amo06g2874 755 SMART serkin_6 416 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2874 755 ProSiteProfiles EGF-like domain profile. 297 340 IPR000742 -
Amo06g2874 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 717 IPR045274 GO:0007166
Amo06g2874 755 SMART egfca_6 297 340 IPR001881 GO:0005509
Amo06g2874 755 SUPERFAMILY Protein kinase-like (PK-like) 398 694 IPR011009 -
Amo06g2874 755 Pfam Wall-associated receptor kinase galacturonan-binding 37 93 IPR025287 GO:0030247
Amo06g2874 755 SUPERFAMILY EGF/Laminin 297 332 - -
Amo06g2874 755 Gene3D Laminin 253 300 - -
Amo06g2874 755 ProSiteProfiles Protein kinase domain profile. 416 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2874 755 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524
Amo06g2874 755 ProSiteProfiles EGF-like domain profile. 251 296 IPR000742 -
Amo06g2874 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Amo06g2874 755 Gene3D Transferase(Phosphotransferase) domain 1 494 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2874 Amo-Chr6 94270671 94273543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2874 35 741 Receptor kinase-like Gene Family AT1G21230 46.301 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo06g2874 Pkinase 1.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2874 - - adu:107495457 918.687