Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2849 ATGTTCCTGTGTGAGATTGTGTTTGCTAGTATTCAAAGGGTAGGAAAGGTATTTCCAGGTCTACAAGGTTCTGAAATGAATTGGAAAGGGGGGAAAATTGTTTGGTCTAGTGACACAAGTGGGAAAGGGGTTTCTTCAATGGAATTGAAGGACACTGGGAATTTGGTTTTGATTGGGAGTAATGATAGTGAAGTGATTTGGCAGAGCTTCGATGATCCGACCGATACATTGCTTCCAATGCAGGAATTCCATAAGGGAATGAAACTTGTTAGTGAGCCTGATTCTAACAACTTTACCTATGTTCTTGAGATTGGATCGTCCGGTGATGTCACTCTTTCGGCCGTGTTACAAACTCTGCAACCAATGCCATATTGGTCTATGCAGAGTGATAGCCGCAGAATCGTCAATAGAGGTGGCAATGAGGTGGCTTCAGCAACCATTGTTGCGAATTCTTGGAGGTTCTATGACAAGAATAAGTCATTGTTGTGGGAATTTGTTTTCAAAGATAATGAGGCTGTGAATGATACTTGGACTGCAGTGTTGGGAAGTGATGGCATTATCACATTCTACAGTCTCCAAAATCAAGGATTGGATGGCGTCGCGCCAAGAAGAATTCCAGAATATTCTTGCAGCACACCGGAGCCTTGTGATCCCTACAATTTATGCACCGGTGACAGAAAGTGCAGCTGTCCTTCTGTTCTAAGCTCTAGGCCTAATTGCAAACCGGGTTTTGCCTCTCCTTGTAACTCGAAAGGTGCAATTGAGCTAGTTAAGGTGGACGATGGACTAAACTACTTTGCGCTCGGGTTCCTTCCACCCTTTTCGAGAACTGATCTGATTGGTTGCAAGACTTCCTGCAGTGAAAATTGTTCATGCCTTGCTATGTTCTTCCAAGAAAGTTCAAGAAGTTGTTTTCTATTGGATTGGATTGGAAGCTTTGAGAAGTCCGATAAGGATACTGGTTTTGTCTCTTACATTAAGGTCTCCAGGGATGGTGGCACTGACAAAGGTGATGGTGGAAATAGTAATAAGCAAACCGTGATTGTTGTGATAATTGTGGTTTTAACATTGCTTGTTATTTCTGGTATGATCTTTCTTGGCCTAAGATACTACAAGAAAAGTGAACATTCAGCCGAGACTCCCCAAGAGAATTCGGATGGTGACACTTTCTTGGAGAACTTAACTGGCATGCCAATTCGCTCTGGCTACAATGATCTTGAAATCGCGACTAATAACTTCTCTGAGAAGCTTGGGCAAGGGGGTTTCGGCTCGGTTTACAAAGGAGTCCTACCAAATGGAACAGAACTAGCTGTGAAAAAGTTGGAAGGAATTGGCCAGGGGAAGAGAGAGTTCAGAGCTGAAGTTAGCATAATTGGTAGCATTCATCATCACCATCTGGTTCGGCTTAAAGGATTTTGCGCCGAAGGAACTCACCGGCTTCTTGCTTATGAGTACATGGCTAATGGCTCCTTGGATAAATGGATATTCAACAAAAACAATGCAGAATTTTCATTGGATTGGGACACAAGGTTCAATATAGCGCTTGGAACTGCGAAAGGACTCGCATACCTTCATGAAGATTGTGACTCAAAGATTGTTCATTGTGATATCAAACCAGAAAATGTGCTTCTAGATGAGAACTTCAATGCCAAAGTTTCAGATTTTGGTCTAGCTAAGCTCATGACGCGCGAACAAAGCCATGTTTTCACAACACTAAGGGGGACTCGAGGGTATCTCGCCCCTGAGTGGATAACAAACTACGCCATATCAGAGAAGAGTGATGTATACAGCTATGGTATGGTTTTGTTAGAGATAATTGGCGGCCGGAAAAACTATGATCCGGCCGAAAGCTCGGAGAAATCCTATTTCCCATATTTTACATTCAAGATGATGGAAGAAGGGAAACTAAGAGACATTGTTGATTCAGAATTGAAAGCATATGAAGATGATGAGAGGGTAGACATTGCAATCAAAGTTGCATTGTGGTGCATACAAGAAGACATGAATCTAAGGCCTTCAATGAGCAAAGTTGTGCAAATGCTTGAAGGTCTTTGCACTGTTCCTAAGCCACCATCAAGATTTTCTCCATTAGGATCTAACATTCACTCAATTCCTTTTTCTATGTCAACTAGTGAGGCTGGAACTTCTTCATCAGCACCATCAGATACTAACACTGAAGCTTTTCTCCGTGGGGTTCAACTTTCAGGGCCAAGATAA 2217 0.4249 MFLCEIVFASIQRVGKVFPGLQGSEMNWKGGKIVWSSDTSGKGVSSMELKDTGNLVLIGSNDSEVIWQSFDDPTDTLLPMQEFHKGMKLVSEPDSNNFTYVLEIGSSGDVTLSAVLQTLQPMPYWSMQSDSRRIVNRGGNEVASATIVANSWRFYDKNKSLLWEFVFKDNEAVNDTWTAVLGSDGIITFYSLQNQGLDGVAPRRIPEYSCSTPEPCDPYNLCTGDRKCSCPSVLSSRPNCKPGFASPCNSKGAIELVKVDDGLNYFALGFLPPFSRTDLIGCKTSCSENCSCLAMFFQESSRSCFLLDWIGSFEKSDKDTGFVSYIKVSRDGGTDKGDGGNSNKQTVIVVIIVVLTLLVISGMIFLGLRYYKKSEHSAETPQENSDGDTFLENLTGMPIRSGYNDLEIATNNFSEKLGQGGFGSVYKGVLPNGTELAVKKLEGIGQGKREFRAEVSIIGSIHHHHLVRLKGFCAEGTHRLLAYEYMANGSLDKWIFNKNNAEFSLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDENFNAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPAESSEKSYFPYFTFKMMEEGKLRDIVDSELKAYEDDERVDIAIKVALWCIQEDMNLRPSMSKVVQMLEGLCTVPKPPSRFSPLGSNIHSIPFSMSTSEAGTSSSAPSDTNTEAFLRGVQLSGPR* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2849 738 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 29 738 - -
Amo06g2849 738 Gene3D Phosphorylase Kinase; domain 1 374 485 - -
Amo06g2849 738 Pfam D-mannose binding lectin 31 84 IPR001480 -
Amo06g2849 738 SUPERFAMILY Protein kinase-like (PK-like) 395 682 IPR011009 -
Amo06g2849 738 SUPERFAMILY alpha-D-mannose-specific plant lectins 29 91 IPR036426 -
Amo06g2849 738 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Amo06g2849 738 MobiDBLite consensus disorder prediction 708 730 - -
Amo06g2849 738 Gene3D - 23 100 IPR036426 -
Amo06g2849 738 Pfam Protein kinase domain 414 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2849 738 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 29 738 - -
Amo06g2849 738 Gene3D Transferase(Phosphotransferase) domain 1 486 689 - -
Amo06g2849 738 SMART serkin_6 411 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2849 738 ProSiteProfiles Protein kinase domain profile. 411 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2849 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Amo06g2849 738 MobiDBLite consensus disorder prediction 708 738 - -
Amo06g2849 738 PIRSF SRK 19 730 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2849 Amo-Chr6 93871529 93874390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2849 358 691 Receptor kinase-like Gene Family AT5G20050 45.070 5.21e-96 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo06g2849 Pkinase 5.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2849 - - adu:107495387 1415.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3645 16 147206126 147208955 Amo06g2849 06 93871529 93874390 hybridization
Amo06g2849 06 93871529 93874390 Amo08g2106 08 33903116 33906840 PCT
Amo08g2106 08 33903116 33906840 Amo06g2849 06 93871529 93874390 PCT