Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2845 ATGGCTAGAGAAGTCATTTCCACTCCACCTGGTGCTTCATTTGACTATGATCTCTTGGAAGGTGATTCTGACATTCCGGGAACTGTTTCCAGGGGAACAAGTCCCTGGATAGAACCTGAAAGATTGAAACTCAGACACAGGATTGGTCGGGGACCCTTTGGGGATCTATGGCTAGCAACTCATCATCATTCCACTGAAGATTATGATGAGTACCATGAAGTTGCTGCTAAGATGTTATATCCAATCAGAGAGGATAATACAAAGATTATATTAGAGAAGTTCAATGAATTATATTCTATGTGCCAAGGAGTTGCTAGTGTTTGCTGGCTACATGGAATTTCAATCATAAATGGAAGGATATGCATCATTATGAATTTGTATGAGGGTTCAGTTGGTGACAAGATGGCTAGACTTAGAGAAGGACGGGTTTCGTTGAAAGATGTTTTAAGGTATTGGATCAATCTGGCTCAAGGTGTTTTGGAACTTCACTCTAAAGGGATCCTTATTCTCAACCTTAAACCATTTAATGTTCTTCTTGATGACAATGATCAAGCGATTTTGGGAGATGTTGGCATTCCCAACCTCTTGCTTGGCTCCTCGTGTCTAAGCTCAGATATGGCTCAGAGGCTTGGAACTGCAAATTACATGGCTCCAGAGCAATGGGAACCAGAGATCAGAGGCCCTATATCCTTTGAAACAGACTCGTGGGGATTCGGCTGCACCATTGTTGAAATGTTGACTGGTAATCAACCTTGGTATGGATGTCCTGTTAGTGTAGTTTACAACTCAGTTGTCGAAAAGCATGAAAAACCCCTTGTTCCAAGTGGCCTTCCTTCTTCAATTGAGAATCTCCTCAATGGATGCTTTGAGTATGATTTGAGGAATCGCCCACTGATGAAAGATATTCAGCGTGTCTTCAAAAGCGCACTTGATGAACTGGCAAATGATGGAGGATGGAGATATCTTGGAAATGTGAAAGCTACTGCAAAATCAAGTAGCACTGGCTACACAGAGTGGTTTCTCTCAAAGGATCCTCTTCAAGTGCATGATATGGTGCGATCCAGGAAGTCTTCCAATTCATGCACATCTCAAAATATGGATGTCCCGGGTGGAACTGTTGTTGGCCTAGAACGTAATCCAGATAATGGATTTGTTCTTGTGAGGGTCCATGGAATTCATGACCCAATAAGAGTTCATGCGTCAACTCTTGAACGTGTCACATTTGGCCTTGCGGCTGGCGATTGGGTTCGATTGAAGGATGAAAGCGAGAAACACTCACCAGTTGGCATCTTACATCACATTGACCGTGAAGGTAGAATGACTGTGGGATTTATTGGTTTGCAGACCCTTTGGAAGGGAAATTCTTCGCAGCTCGAAATGGCTAAATCATACTGTGTTGGCCAGTTTGTTAGGCTGAAAGAGAATGTCTTGAGTCCTCGATTTGAATGGCGTAAACGGAGAGGGACCTGGGCTACTGGCAAAATTTCATGGATCCTACCAAACGGGTGTTTGGTCGTCAAGTTCCCAGGGCTGCTGCCTCTTGGTAACGAATCAAGAACCTTCTTGGCTGATCCTTCTGAGGTTGAAATTGTTGATTTCAAGACTTGTCCCGGAATGATAGAGAAGTATCAACATGTAGAGGATCATCATTGGGCAATTAGGCCTGTTCTAATTGCGTTCGGCATATTCACAGCTTTGAAATTTGGCATGTTTGTTGGAAAGAAGGTTGGGAGGAGCATGAAGAAAGTCAATGCAATAGAAAGTGAAGTTGATGGTCAAAATGCTAACAATTCTACAAGGAGATCTTCCACTGCTATTATGAATCCTGGCAACCCAACTTGGGTTCCTTCGGTTGCCAACATTCTCTTCAAAGAAGGTGGCGGTTCCACTCCCACAGCTCGGTAG 1905 0.4346 MAREVISTPPGASFDYDLLEGDSDIPGTVSRGTSPWIEPERLKLRHRIGRGPFGDLWLATHHHSTEDYDEYHEVAAKMLYPIREDNTKIILEKFNELYSMCQGVASVCWLHGISIINGRICIIMNLYEGSVGDKMARLREGRVSLKDVLRYWINLAQGVLELHSKGILILNLKPFNVLLDDNDQAILGDVGIPNLLLGSSCLSSDMAQRLGTANYMAPEQWEPEIRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVSVVYNSVVEKHEKPLVPSGLPSSIENLLNGCFEYDLRNRPLMKDIQRVFKSALDELANDGGWRYLGNVKATAKSSSTGYTEWFLSKDPLQVHDMVRSRKSSNSCTSQNMDVPGGTVVGLERNPDNGFVLVRVHGIHDPIRVHASTLERVTFGLAAGDWVRLKDESEKHSPVGILHHIDREGRMTVGFIGLQTLWKGNSSQLEMAKSYCVGQFVRLKENVLSPRFEWRKRRGTWATGKISWILPNGCLVVKFPGLLPLGNESRTFLADPSEVEIVDFKTCPGMIEKYQHVEDHHWAIRPVLIAFGIFTALKFGMFVGKKVGRSMKKVNAIESEVDGQNANNSTRRSSTAIMNPGNPTWVPSVANILFKEGGGSTPTAR* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2845 634 Pfam Protein tyrosine and serine/threonine kinase 42 304 IPR001245 GO:0004672|GO:0006468
Amo06g2845 634 PANTHER OS06G0639500 PROTEIN 1 629 - -
Amo06g2845 634 Gene3D Phosphorylase Kinase; domain 1 28 127 - -
Amo06g2845 634 PANTHER OS06G0639500 PROTEIN 1 629 - -
Amo06g2845 634 ProSiteProfiles Protein kinase domain profile. 42 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2845 634 MobiDBLite consensus disorder prediction 590 609 - -
Amo06g2845 634 Gene3D Transferase(Phosphotransferase) domain 1 128 333 - -
Amo06g2845 634 SUPERFAMILY Protein kinase-like (PK-like) 39 304 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2845 Amo-Chr6 93812349 93817437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2845 25 313 MAP Kinase Kinase Kinase AT2G17700 25.253 5.68e-21 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Amo06g2845 PK_Tyr_Ser-Thr 7.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2845 - - gsj:114393396 971.459