Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2832 ATGAAAGGTGTTGGGTTGCTATTCTGGAATTTGGAAATTAATTGCTTCCATTGGCTCTTTTTATTGACATTTTTGGGTAAAATTATGTCCATAAACGAGGATGATGTGAAGAATGATTCTGATAATGATTTGGGTAATAATTTCGATTATCAACCGAATGCAGAAGATGATGCTGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGACGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGAATAATCAAGGTAGAATCATTAGCAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACGGTTGCGGTAGATGGAAGGTATCATGTTTTATAGAATCTCACAACCACGATCTGACACCACCCCAATTTGCGCATCTGGTTCCGGCCAATCGTCGTCTCACTGTCACTGATAAAGTCCAAAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAATTAATAGCTGACTTTAAGTCTCGGTGCTCAGAACCAGTGATGATTACCTCGTTGGAGGTATATGAAAGATCTGCATCATGTTATTTAACTCGAAACATTTTTAAGGAAATTTGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATCAAGGTACTAAGCACAACCTTGGGCAAGGTTGAGTTCAATGTGACTGCTCTCGGAGACCCGGCCAAAGATCGACGGGTGGAAGTCGATAGAAGTAAGAATCTGTTCTCGTGGACAAAGAATGCAAAGAACGAATTTTTTAGCATAGAAATGCCTGTGCATGATGACGTCGAAAGGGTCTTAAAGTTTCGAGTTGGTGCATTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTGCAGACTTTGATGAAGTCCAGTTTGAACTTCTCAATTTAGTTATCCGCCTGCACAAAGGAGCCCCTTCCAAGAGGTCTTCTTGGAGGAAGAAGAGAGCATGCTTTAATTGCCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGTGCAAGGTAACCCTCGCAATCGATCAGACGGCAATGCATCAGCCAAGGACTCAGGTTTTAGTCCAGAAAGGTTTGCTAATTCTTCAAGGTCGTTCTCAGTTAAGTCTGAACACCACTCGGGCCCTAAGACCAAGCCTTTTAAAAAGGGTGGAACAAGGAAGTTTACGGCGAAGGGTATGAGGAACCAGAAGGGTAAAGACAACACGTTTGATGAGGTAATTTTTGTGAATATAAACCTCTAA 1434 0.4268 MKGVGLLFWNLEINCFHWLFLLTFLGKIMSINEDDVKNDSDNDLGNNFDYQPNAEDDAEDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVRNNQGRIISREARSLTRTKCPARLRVKLDYGCGRWKVSCFIESHNHDLTPPQFAHLVPANRRLTVTDKVQNTLIDFMHNLDRALKEYRNNELIADFKSRCSEPVMITSLEVYERSASCYLTRNIFKEICNEIQRAGALNIKVLSTTLGKVEFNVTALGDPAKDRRVEVDRSKNLFSWTKNAKNEFFSIEMPVHDDVERVLKFRVGALASNCNKLCDIACKDLADFDEVQFELLNLVIRLHKGAPSKRSSWRKKRACFNCHKYGHYYKRCPDLMQHSVQGNPRNRSDGNASAKDSGFSPERFANSSRSFSVKSEHHSGPKTKPFKKGGTRKFTAKGMRNQKGKDNTFDEVIFVNINL* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2832 477 MobiDBLite consensus disorder prediction 397 432 - -
Amo06g2832 477 MobiDBLite consensus disorder prediction 42 70 - -
Amo06g2832 477 Gene3D - 370 426 - -
Amo06g2832 477 MobiDBLite consensus disorder prediction 53 67 - -
Amo06g2832 477 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 90 174 - -
Amo06g2832 477 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 90 174 IPR031052 GO:0006355
Amo06g2832 477 MobiDBLite consensus disorder prediction 397 460 - -
Amo06g2832 477 Pfam FAR1 DNA-binding domain 130 170 IPR004330 -
Amo06g2832 477 ProSiteProfiles Zinc finger CCHC-type profile. 377 392 IPR001878 GO:0003676|GO:0008270
Amo06g2832 477 SUPERFAMILY Retrovirus zinc finger-like domains 364 395 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2832 Amo-Chr6 93627001 93631139 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo06g2832 FAR1 6.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2832 - - ahf:112755379 477.248