Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2823 ATGGCAGAAATAGCAGTAAACCTTGTTGTTGACAAACTAATCCCATTACTAAAAAATGAGGCAAAGTTGCTGAGTGGCGTGCGTGGCCAAATCGAAAGGATCAGCGACGATCTACGGCTGATGCGAGCGTATCTGAGGGATGTAGATGCAAAGGCGGAGATGGAGGCAGAGAACTCTGATCAGAGCAGAAAGGAGTGGGTTGCTCAAATCAGACACGTTTCCATCCACATTCAAGATGTGATCGACCTTTACTTGTACAAGGTGGCCAACAATGATGATGACGACCACCACAATCGACGCCGTGGACGGCGAAACGCCGTTGCTGGGGTTCTGTGCAAAATTTGTGACTTGCTCAAAAGTTGTGTAGGGCGCCATGAGATTGCATCTGAGATTGGCGAAATCAGAGAGTCAATAAATAGACTGAAGGATGCAAGACAACTGTATGGCGACTCCAAAGCTGCTGCAGAATCAAGCGGCGGTCGCAGTTCATCACCGCAACGGCATTACCTTCGACTGCGAGCCAATTTTGCTGAGGAAGAAGAGCTTGTGGGGATTGAACATGCCAAGAAAGAGCTCAACAACTGGCTCTCAGAAGGCGGTGCTGCTCGCACAGTCATCGCCGTGGTGGGCGAAGGCGGACTTGGTAAAACGACTCTGGTGAGAAATGTATACAAGCAAGAACAACAAAAGCACTCTTTTGATTGTTATGGATGGGTGGATGTATCTCGCTCACTCAAAGGAGTGCAGTTGTTCAAGGCTTTGCTGCGGAGCTTTGGTGATATGAAAGGAAGCAATGTGGACAACAACCTTCATGCTTTGATTGAAGATACAAGAGAATACTTGAAAGAAAAGAAGTACTTAATAGTACTTGATGATGTTTGGGAAACAGAGCTTTGGGGAGCTGTGGAATTGGCATTGCCGAAAAATAATGGAATGATAATGATTACAACAAGAGACACGGGTGTTGCTGATTCTTGCAAAGTGTCAGCAAAAGTTCATACCTACCCACTGGAGCCTCTAGAACCCGAAAATGCCTTGAGACTCTTCCATTCGAAGGCATTTCAATCTGGTTCTAAGAATCTCTGTGAAGAGTTGATGAAACTATCTGAAGAGTTCACAAAAAAGTGTGACGGTGTGCCACTTGCAATTGTGGCTATAGCTTCTCTTCTGTCAACCAAGAAAGAAAGAGTCTCAGATTGGAAGGTGGTGTACAACAGCCTTCAATCAAAGCTTGCAAGCGATTCTCATCTTAAAGGTTACCATCAGGCACTGTCAGAAAGTTATCAGGATCTTAGTTACCACCTCAAGTCATGTCTCTTGTACTTTGGCCTTTTTCCCGAGCAATACGCAATCAAGAGGGCAAGGCTCATCAATTTGTGGATAGCTGAAGGGTTTGTGGAGTGCAGAGAGCACCAAACTCAACAAGAAGTTGGAGAAGAGTACTTAGCTGAGCTCATTGCTAGGAGCTTGGTTAAGGTAGCTTATGTGAACAGTTACAGCAGAGTTAGAAAGTGTAGAGTTCATGATTTAATGCATGACTTCATTGTCAAGAAATGTGAAGAGTTCAACTTCTGTCAAGTGAAGAAAGATGAGGAGGAAACGATAAGCACTTTTGTGAACTCACTTTTCTCTAATTTCAAGCTCTTGGTGACACTGGACTTTGAGAAAATACCAATTGATCATGTTCCAGAAACAATTGGAAACTTTGTCCACTTGAAATACCTAAATTTAAGATATAGCAACATTGAGATCATCCCCGAATCCATCGGAAAGCTTCGAAACCTAGAGACTCTTGACCTAAAAGGGACCAATGTGAATGATCTTCCAGTGGAGATTTACTCACTTACAAAGCTGTGTTATCTTAATGTGCAGACAAAAGCGTGGAAAGGTGTAAAATTAAAGAGAGGGGTTGCAAATTTAACGGCTCTACAAAAATTAGCCGGGGTTGATGCAAGTGATGTTTTTGGGGAACTGAAGAATTTGAAGCAATTGAGGAGTTTGAAGATCGAAAATGTTGATAGAAAGGATGGAATGTGGTTGTGCAATGCTATAGAGAGCATGACCAATCTATGCTCATTGTTGATAAATGCCAAACACAATGAAATCCTTGAATTGGAGTCACTAACTAGTCCTCCTCCACACCTTGAGCGTCTTTACTTATATGGAGTAATGGTGCCAGATTGGGTTTTTAGACTCAAAAATCTTATCGGGTTGGAGTTGATACGGTTTAAATTCACACAAGACCAATTGTGTCTTGTAGGGCGCCACCTGCCAGAATTGATGCGACTTTATGTCCGCCCATTCGAGGGTGATGAATTAAACATCCAAAAGGGGTGGTTCGGGAAACTACGATCACTCACCCTAGCGGATTCAACATTGAAAGCTATTAGAATAGATGAAGGATCACTGCCTTGCCTCCAAGAGTTCTTTCTCGCACTTAGGAATTGGAATCTAGAAGCAGTACAAGTGCCAGATCATGTTCGGAAACTCATGCATGTTATATAG 2505 0.4323 MAEIAVNLVVDKLIPLLKNEAKLLSGVRGQIERISDDLRLMRAYLRDVDAKAEMEAENSDQSRKEWVAQIRHVSIHIQDVIDLYLYKVANNDDDDHHNRRRGRRNAVAGVLCKICDLLKSCVGRHEIASEIGEIRESINRLKDARQLYGDSKAAAESSGGRSSSPQRHYLRLRANFAEEEELVGIEHAKKELNNWLSEGGAARTVIAVVGEGGLGKTTLVRNVYKQEQQKHSFDCYGWVDVSRSLKGVQLFKALLRSFGDMKGSNVDNNLHALIEDTREYLKEKKYLIVLDDVWETELWGAVELALPKNNGMIMITTRDTGVADSCKVSAKVHTYPLEPLEPENALRLFHSKAFQSGSKNLCEELMKLSEEFTKKCDGVPLAIVAIASLLSTKKERVSDWKVVYNSLQSKLASDSHLKGYHQALSESYQDLSYHLKSCLLYFGLFPEQYAIKRARLINLWIAEGFVECREHQTQQEVGEEYLAELIARSLVKVAYVNSYSRVRKCRVHDLMHDFIVKKCEEFNFCQVKKDEEETISTFVNSLFSNFKLLVTLDFEKIPIDHVPETIGNFVHLKYLNLRYSNIEIIPESIGKLRNLETLDLKGTNVNDLPVEIYSLTKLCYLNVQTKAWKGVKLKRGVANLTALQKLAGVDASDVFGELKNLKQLRSLKIENVDRKDGMWLCNAIESMTNLCSLLINAKHNEILELESLTSPPPHLERLYLYGVMVPDWVFRLKNLIGLELIRFKFTQDQLCLVGRHLPELMRLYVRPFEGDELNIQKGWFGKLRSLTLADSTLKAIRIDEGSLPCLQEFFLALRNWNLEAVQVPDHVRKLMHVI* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2823 834 Pfam Rx N-terminal domain 5 96 IPR041118 -
Amo06g2823 834 Gene3D Ribonuclease Inhibitor 518 831 IPR032675 -
Amo06g2823 834 PRINTS Disease resistance protein signature 590 606 - -
Amo06g2823 834 PRINTS Disease resistance protein signature 205 220 - -
Amo06g2823 834 PRINTS Disease resistance protein signature 280 294 - -
Amo06g2823 834 PRINTS Disease resistance protein signature 376 390 - -
Amo06g2823 834 CDD RX-CC_like 2 138 IPR038005 -
Amo06g2823 834 SUPERFAMILY L domain-like 506 821 - -
Amo06g2823 834 PANTHER - 35 822 - -
Amo06g2823 834 Gene3D - 340 432 IPR042197 -
Amo06g2823 834 Gene3D - 4 128 - -
Amo06g2823 834 PANTHER DISEASE RESISTANCE PROTEIN RP 35 822 IPR044974 GO:0006952
Amo06g2823 834 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 442 IPR027417 -
Amo06g2823 834 Gene3D - 434 517 IPR036388 -
Amo06g2823 834 Pfam NB-ARC domain 186 429 IPR002182 GO:0043531
Amo06g2823 834 Gene3D - 166 333 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2823 Amo-Chr6 93469016 93473278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2823 181 445 WRKY Transcription Factor Family AT5G45050 24.176 9.47e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2823 K13457 - qsu:111987192 564.688