Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2797 ATGGCACCAAAACCTACCAAGGCTGAGAAGAAGATCGCTTACGATGCTAAGCTCTGCAAGCTTCTCGAGGAATACACTCAGATCCTTGTTGTCAATGCCGATAACGTTGGATCTAACCAGCTCCAGAACATTCGCAGGGGTCTTCGTGGTGATTCCATTGTTCTTATGGGCAAGAACACCATGATGAAGCGTTCTGTTAGGATGCACGCTGAGAGTACTGGAAACGATGTGTATCTCAGCCTTATCCCCCTTCTTGTTGGAAACGTGGGATTGATCTTCACTAAAGGTGACTTGAAGGAGGTTAGCGAAGAGGTTGCTAAGTACAAGGTTGGAGCACCGGCTCGTGTTGGTTTGGTTGCTCCGATTGATGTTGTTGTTCCTCCGGGCAACACAGGGCTTGACCCCTCACAGACCTCTTTCTTCCAGGTGCTGAACATTCCAACTAAGATTAACAAGGGTACTGTCGAAATTATCACCCCTGTAGAACTTATTAAGAAGGGTGACAAGGTTGGCTCTTCTGAAGCTGCATTGCTTTCCAAGCTTGGCATCAGGCCCTTCTCATATGGTCTTGTTGTCCTTTCTGTGTATGACAACGGTTCAGTGTTTAGCCCTGAGGTTCTTGACCTCACTGAGGATGACCTTGTTGAGAAGTTTGCCGTTGGAGTCTCGATGGTGACCGCACTCTCATTGGCCATCTCATACCCAACACTTGCTGCTGCCCCACATATGTTCATCAATGCCTACAAGAATGTTTTGGCTGTTGCTGTTGAGACAGATTACTCTTTCCCAGAGGCTGACAAGGTTAAGGAGTATTTGAAGGATCCAAGCAAATTTGCTGTGGCTGCTGTTGCTGCTCCTGCTGCTGCCGCCGGTGGTGCGCCAGCTGCTGCTGCCAAGGAAGAGGAAAAGAAGGAAGAGCCTGCTGAAGAATCTGATGATGACATGGGCTTCAGTTTGTTTGATTAG 966 0.4824 MAPKPTKAEKKIAYDAKLCKLLEEYTQILVVNADNVGSNQLQNIRRGLRGDSIVLMGKNTMMKRSVRMHAESTGNDVYLSLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLVEKFAVGVSMVTALSLAISYPTLAAAPHMFINAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAAAGGAPAAAAKEEEKKEEPAEESDDDMGFSLFD* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2797 321 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Amo06g2797 321 MobiDBLite consensus disorder prediction 293 321 - -
Amo06g2797 321 Gene3D - 114 185 IPR043164 -
Amo06g2797 321 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Amo06g2797 321 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 321 - -
Amo06g2797 321 Gene3D - 6 209 IPR043141 -
Amo06g2797 321 Pfam Ribosomal protein L10 7 108 IPR001790 -
Amo06g2797 321 Pfam 60s Acidic ribosomal protein 234 320 - -
Amo06g2797 321 CDD Ribosomal_P0_L10e 9 185 - -
Amo06g2797 321 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 321 - -
Amo06g2797 321 MobiDBLite consensus disorder prediction 306 321 - -
Amo06g2797 321 PIRSF L10E 1 321 IPR030670 GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2797 Amo-Chr6 92802394 92804782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2797 1 320 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 82.500 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2797 K02941 - gmx:100777482 543.502