Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2774 ATGTCCTTCAATCAATCAAAATCCGACAAGAGTGACGCTGTGTACCGAAAATCCGGGCGATCTGCCYGCTTCAATCAGCAGCGAGGCTCCTCCGGTGGTGCATACGGTAGGGGCGGCGGTGCCGCACCTTCTCCGTCACTATCCTCTAACCGCAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTTCTGCACTAACCGAGTCTAATAGTACTTATGCAACCCGGACTGCACCAAATGGTAGCCATGTACAGCCTCAATTTCATGGAGGATCTGATGCACCCGTTACCAATATCACTGTCAAGTCATCAGAATCCTCAAATGCTCAGAGGACAACCAGAGCTGTTCCAAAAGCTCCTACTTCTCAACCTCCCACCTTGAGTTCTGATTCAGCTGCTTTGACAACCGCTGCTAAGGGAGATGCATCCAAGGCATTTCCTGTCCAATTTGGATCTATTAGTCCAGGTTTTATGAATGGAATGGCGATTCCTGCTCGCACAAGCTCAGCTCCACCCAATTTAGATGAGCAGAAGCGTGATCAGGCCCGCTATGATTCTTTTAAACCTGCTCCAGCACCAGCACCAGCACCAACACCAGCACCTCCTGTTCCAAAGCAGCACCCTGTGAAGAAGGATACAGGTATTACTGATCAATCTCATGCTGGGACTAGGGCGAAGAAAGATATGCAGGTGTCAGCATTGCCTCCTGGAAGCCAGATGCAAAAGCCTTCTGTTGTTCCTTTAAGTGGAATTTCAATGCCAATGACGTATCATCAGCCCCAGGCATCTGTACAGTTTGGTGGTCCGAATCCGCAGATTCAATCTCAGGGTATGCCAACAGCATCTCATCAGATGCCTTTACCTATGCCTTTGCCAGTTGGAAATGCTCCACAAGTGCAGCAGCAGGTCTTTGTTCCAGGCCTTCAACCTCATCAGATGCATCAAGGACTCATTCATCAGAGCCAAAACATGAGTTTTACTCCTCAAATGGTCCCTCAATTGCCCCATCAGTTAGGTAGCATGGGCATTAGCATTGGCCCACAATATTCCCCACAGCAAGGAGGAAAATTTGCTCCTCGTAAAACTACTCCTGTCAAGATAACTCATCCTGAGACCCATGAGGAACTTAGGCTTGATAAAAGGGCAGACACGTATTCAGATGGTGGGTCATCCGGTGCTAAATCTTACTCTAGTGTGTCTTCTCAATCTCAACCTGCAATGCCAGTTTCTCATCCTATTAATTACTATCCATCCCATGCTCCCTTCTATCAACCCTCTAGTAGTAGTCAGATAACACCAAATTCTCAGCCACTGAGATTTAATTATGCAGTGAGCCAGGGTCCCCAAAATGTTAGTTTCATGAATTCATCTTCTCATAGTTCACTACCTGTTAATAAAGTTGTCAATCATATCCCTGGCATTGTTGAATCATCAAATCCAAAATTTTCCCGGGATGTGCATAATGCTATCTCACAATCTTCAACAGGAGCAACTTCTGTGTCTGTTAAACTTAGTAGTGGGTCTGGTGTTGTGGACTCATCAGTTGCCAATTCCAATATTTCTGCTGCCCAAAAGAGTGACCCTGCCAGAGCTTCAGTAGTGTCTGGTAATGCTAGCTCCTCTTTGCCACAAAAAGGTTCTGAAACCTCCTCTGAGGCTTCGTTGGAACAGTCTAAGTTATCCGGTGATTCTTCAGTTTTGAGCTCATTGCCAAAACAATCTGCTGCATATACTAAGGTTACAGCTGCTCCCATGAAGCCTTCATCTGCTGTGAATGAGGAGGCTGTTTTAGTTGTGTCTAATAATGAAGAAAAGGGGAAGGAATCTCTGAGTAGGTCAAATTCTTTGAAAGATAATAAGAAGGTACAGAAGGAAGGCCAATTACAGCATCCAGTTGTACAGTCTCCTACTGTTTCATATGTGTCTTCCCAAGCTGTTGAGAGATCTACTGGGGATTCTGAAACTGTAGTAACTAAAACAAACCATTCTGCAGCTGTTATCAGTGAAGATATCACAACAACGACTGAAGATACATTACCAACTCCCCTTTTGAGTATGCCTCATGCTGAAGCAAAAAGAAATGGTGCTGTAGAACCTTCTACTCATGTTTCAGCTGAAGGACCTGTTGCTCAAGCTGCGGATAGTTTGAAAAAGAATGATGAGCTAGATGAATTTTCACAACTGGATAAACTTRCAAAGAATAAAGATTCAGAAATGGGTGAAAATACTGAAATATCATCTATTCAAGGATGTAAACGGGAGCTGGATGAAWCTACAAGRWMTKRWSKAMYWMMWYWKAAKAAKKKRKCTYCWMRYMMMMSTTCTWCWYKWGWTMMTTMMWMMAGWYYWGATATTGCAGTTAGTAGTGAAGCTGTTGTAAGTTCTCCGACATTAGACCAGAATTCATCTGATATTCCAGAAACAACATCAGAACATTTCGATGATGGTWTAGAGAATGCTGGCAGTGTAGTTTRTCTTCCAGCACCAGATACTAATGATAGATCAATTTTAGATCAAAATAAGGTAAAAACTACATCTAAGGCGAAAAAYAAAAGAAAAGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACCTCTGATCTTTATAATGCATACAAGGGACCTGAAGAGAAGAAAGATGCTGTTGTTAGCTCAGAAGAAGTGGCAAGAGTTTCTACTTCTGGAAGTTTGGAGCAGTTGTCTACTAATGCTGCTCAGCCAGATGCTATAGCAGGTGAGCAATGTAGGGAGAATAAGGCTGAACTTGATGATTGGGAGGATGCTGCTGACACGTCTTCACCAAAACTTGAAGTTTCAGATCAAACTGAACAGGTTATTGATGGATGTGTAGTCATTGTGAAGAGGTACTCTCGAGATTTCCTTTTGAAGTTTGCAGAGCAGTGCACCGATCTTCCTGAAGGATTTGAAATCACAGCAGATATTGCGGAGGCTTTGATCAGTGCCAACATTAGTAGTTCATGTGATCCGCATCCTTCTCCTGGAAGGAATATAGATAGGACTGGTGGGATGTCTAGGATAGATCGGCGTGGAGGTGCTATTACTGAGGAAGACAAGTGGAGTAAAGTTTCCAATTCTTTTCATTCTGGTATGCGTTTGGATAGTATTGGAGGTAATGCAGGATTTCGTCCAGTTCAAGGAGGCAATTTTGGTGTATTAAGGAATCCTCGCTCGCCTCTGCCATATGCTGGAGCTGGAGGGATTCTTTCTGGGCCAATGCAATCCATGGGAAATCTGGGAGGAATGCCAAGAAACAGCTGTGACAGTGAAAGGTGGCAGCGTGCTTCAAGCTTCCAGCAAAGGGTTTTGGTTCCTTCTCCTCCTCAAAGTCCTTTGCAGATGATGCACAAAGCTGAAAAGAAGTATGAAATCGGTAAAGTGACAGATGTGGAAGAGGCCAAGCAGAGGCAATTGAAAGCTATATTAAATAAYTTGACTCCTCAGAATTTTGAGAAGCTTTTTGAGCAGGTAAAAGCAGTTAACATTGACAATGCAGTAACTCTCACTGGTGTCATCTCACAAATATTTGAGAAGGCTTTGATGGAACCTACCTTCTGTGAAATGTATGCCAATTTCTGTTCACATTTGGCTGCTGAGTTGCCTGATTTTAGTGAAGACAATGAGAAGATAACTTTTAAGAGATTATTGCTGAACAAGTGTCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAGGAAGAAGCAAACAAGGCGGATGAAGGTGAGGTCAAGCAATCTAATGAACAAAGGGAAGAGAAAAGGACAAAGGCAAGAAGACGCATGCTGGGTAATATCAGATTGATAGGAGAACTGTATAAGAAGAAAATGTTAACAGAGAGGATTATGCATGAGTGCATCAAGAAGTTATTAGGTCAGCATCAGGATCCGGATGAAGAAGATATTGAGGCTTTGTGCAAGCTCATGAGTACGATTGGGGAGATGATTGACCATCCCAAAGCCAAGGTTCATATAGATGTATATTTTGAAAGGATGAAATCATTATCAAACAACATGAATTTATCTTCGAGGGTGAGGTTCATGTTGAAAGATGCCATRGATTTAAGAAAGAACAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTACCCAAGAGAGGCAGGCCCAAACKGGTAGGTTGGGTCGTGGTCTGGGCAATAATCCAGCAAGAAAAAARCCTGTAGATTTTGGTCTGAGAGGGGCATCTATGTTACCTTCACCTGTTGCTCAGATGGGTGGATTACGTGGGCTGCCTTCTCAAATTCGCGGATATGGTCCACAGGATGCTCGAATGGAAGACAGGCATGAGGCTAGGATTCTCTCAGTTCCAATGAGTCAAAGATTGGGTGATGATTCAATAACCTTGGGACCCCAAGGAGGTCTTGCTAGAGGAATGTCCTTAAGAGGTTCAACTGCAGTTTCAAGTTCAACCAGTTTTAATGGTTATACTAATTTAGCAGAGGGCTCACCATACAGTTCTAGGGAGGGCCTAGCATCAAGATATATTCCAGATAGATTTGCTGCGCGAACAGCTTCTGATCAATCAAGTGCCCAAGAGCGAAATATCAATTACGGTAACAGGGACCCGAGAAATGCAGATGGGAATTTCGACATGCCTGTTGTAACTTCGCCTTCTCAACTTCAAGGGACAGCAGTCTCCCAGATTCCTTCTTCAGAAAGGGTTTATCCGGGGGAACGGTTGCTAGACATGTCAATGGCAGCAATAAGAGAATATTATAGTGCTAGGGATGAGAAGGAAGTTGTTTTGTGTGTGAAAGATTTGAACTCTCCAAGCTTCCATCCTTCCATGGTGTCTATTTGGGTCACAGACTCTTTCGAGAGAAAGAACACAGAGAGAGATCTTCTGGCTCAGCTACTAGTCAACCTTGTGAAGTCTCAGGATGGTATCTTGAGTCAAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGTACTTTGGAAGATTCAGTTAACGATGCCCCCAAAGCACCAGAGTTTCTTGGCCGCATTTTTGCCAAAGCTGTAACAGAGCATGTAGTCTCTTTGAAAGAGATTGGGCAGTTAATACATGATGGRGGTGACGAACCTGGCAGTCTCTTAGAAGCAGGACTCGCAGCTGATGTTCTTGGAAATACCTTGGAGGTCATAAAAATGGAGAAAGGTGATGARGTTTTAAGTGAGATCCGGACAAGCTCCAACTTGCGGTTGGAGACTTTCAGGCCACCTGAACCTTTGAAATCAAGGAAGTTAGAGAGTTTTATTTAG 5325 0.4312 MSFNQSKSDKSDAVYRKSGRSAXFNQQRGSSGGAYGRGGGAAPSPSLSSNRSFNKKSNNAQGGQSRVNPSALTESNSTYATRTAPNGSHVQPQFHGGSDAPVTNITVKSSESSNAQRTTRAVPKAPTSQPPTLSSDSAALTTAAKGDASKAFPVQFGSISPGFMNGMAIPARTSSAPPNLDEQKRDQARYDSFKPAPAPAPAPTPAPPVPKQHPVKKDTGITDQSHAGTRAKKDMQVSALPPGSQMQKPSVVPLSGISMPMTYHQPQASVQFGGPNPQIQSQGMPTASHQMPLPMPLPVGNAPQVQQQVFVPGLQPHQMHQGLIHQSQNMSFTPQMVPQLPHQLGSMGISIGPQYSPQQGGKFAPRKTTPVKITHPETHEELRLDKRADTYSDGGSSGAKSYSSVSSQSQPAMPVSHPINYYPSHAPFYQPSSSSQITPNSQPLRFNYAVSQGPQNVSFMNSSSHSSLPVNKVVNHIPGIVESSNPKFSRDVHNAISQSSTGATSVSVKLSSGSGVVDSSVANSNISAAQKSDPARASVVSGNASSSLPQKGSETSSEASLEQSKLSGDSSVLSSLPKQSAAYTKVTAAPMKPSSAVNEEAVLVVSNNEEKGKESLSRSNSLKDNKKVQKEGQLQHPVVQSPTVSYVSSQAVERSTGDSETVVTKTNHSAAVISEDITTTTEDTLPTPLLSMPHAEAKRNGAVEPSTHVSAEGPVAQAADSLKKNDELDEFSQLDKLXKNKDSEMGENTEISSIQGCKRELDEXTRXXXXXXXXXXXXXXSXXXXXXXXDIAVSSEAVVSSPTLDQNSSDIPETTSEHFDDGXENAGSVVXLPAPDTNDRSILDQNKVKTTSKAKNKRKEILQKADAAGSTSDLYNAYKGPEEKKDAVVSSEEVARVSTSGSLEQLSTNAAQPDAIAGEQCRENKAELDDWEDAADTSSPKLEVSDQTEQVIDGCVVIVKRYSRDFLLKFAEQCTDLPEGFEITADIAEALISANISSSCDPHPSPGRNIDRTGGMSRIDRRGGAITEEDKWSKVSNSFHSGMRLDSIGGNAGFRPVQGGNFGVLRNPRSPLPYAGAGGILSGPMQSMGNLGGMPRNSCDSERWQRASSFQQRVLVPSPPQSPLQMMHKAEKKYEIGKVTDVEEAKQRQLKAILNNLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLAAELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSNEQREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQHQDPDEEDIEALCKLMSTIGEMIDHPKAKVHIDVYFERMKSLSNNMNLSSRVRFMLKDAXDLRKNKWQQRRKVEGPKKIEEVHRDATQERQAQTGRLGRGLGNNPARKKPVDFGLRGASMLPSPVAQMGGLRGLPSQIRGYGPQDARMEDRHEARILSVPMSQRLGDDSITLGPQGGLARGMSLRGSTAVSSSTSFNGYTNLAEGSPYSSREGLASRYIPDRFAARTASDQSSAQERNINYGNRDPRNADGNFDMPVVTSPSQLQGTAVSQIPSSERVYPGERLLDMSMAAIREYYSARDEKEVVLCVKDLNSPSFHPSMVSIWVTDSFERKNTERDLLAQLLVNLVKSQDGILSQAQLIKGFESVLSTLEDSVNDAPKAPEFLGRIFAKAVTEHVVSLKEIGQLIHDGGDEPGSLLEAGLAADVLGNTLEVIKMEKGDEVLSEIRTSSNLRLETFRPPEPLKSRKLESFI* 1775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2774 1774 MobiDBLite consensus disorder prediction 338 441 - -
Amo06g2774 1774 Gene3D - 1583 1774 - -
Amo06g2774 1774 ProSiteProfiles MI domain profile. 1586 1710 IPR003891 -
Amo06g2774 1774 Coils Coil 754 763 - -
Amo06g2774 1774 SUPERFAMILY ARM repeat 1582 1764 IPR016024 -
Amo06g2774 1774 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 122 1764 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 611 631 - -
Amo06g2774 1774 Coils Coil 1229 1249 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 537 573 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 1494 1510 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 426 441 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 1239 1267 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 1529 1545 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 349 363 - -
Amo06g2774 1774 Gene3D - 1147 1382 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 196 212 - -
Amo06g2774 1774 Pfam MIF4G domain 1147 1369 IPR003890 GO:0003723|GO:0005515
Amo06g2774 1774 MobiDBLite consensus disorder prediction 606 634 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 1384 1421 - -
Amo06g2774 1774 Coils Coil 781 781 - -
Amo06g2774 1774 SUPERFAMILY ARM repeat 1143 1371 IPR016024 -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 394 415 - -
Amo06g2774 1774 Pfam MA3 domain 1594 1699 IPR003891 -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 43 142 - -
Amo06g2774 1774 SMART ma3_7 1587 1701 IPR003891 -
Amo06g2774 1774 Coils Coil 765 766 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 998 1019 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 372 390 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 1494 1514 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 1 301 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 1427 1446 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 802 841 - -
Amo06g2774 1774 SMART if4_15 1147 1369 IPR003890 GO:0003723|GO:0005515
Amo06g2774 1774 MobiDBLite consensus disorder prediction 260 288 - -
Amo06g2774 1774 MobiDBLite consensus disorder prediction 1528 1563 - -
Amo06g2774 1774 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 122 1764 IPR045208 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2774 Amo-Chr6 92470878 92480469 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2774 1 1773 Eukaryotic Initiation Factors Gene Family AT3G60240 45.479 0.0 1225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2774 K03260 - gmx:100796636 2266.5