Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2739 ATGCTGCCGGCAAGGAAGCGGCGAGGGCGACGGCCACGGACGACACAAGTTGTTAACTTTGGGACGCCGAAAAATGAAGTTCCGAGTGATAATAATGTTGACCTTGACAAAGACGCCAAAGACGATGATGGAGCTACAAATTCCTCTCTTGTTCAGAACTCCAAGGGAACAAGGCAGGACAGAAAGCGAAAGATGGCGAAGATTTCTAGTAACGTCGGAACTAGCAGCAGAAGCAGGGCTGAGAGTGAAGAGGATGAAAATGGTTATTCGACGGCGACGGAAAGTGAACTTCCGAGTGATAATGTTGAGCTTGGGTTGGATAAAGATTCTCAAAAGGACGTCGCCAACGGCAGGAGGTTCCTACTTCGGAAGCATCCACAGGAGACACCCAAATTCATTAGGAGAGGCCCTAAATTTTTTGAAGAGGAGAGCTTAATGTGCCATCAATGTCAGAGAAATGACAAAGGTGACGTTGTGAGGTGCAAAAATTGCAAGCGGAAAAGATTCTGTATGCCTTGTTTGGCTAGCTGGTATCCTGAATTAAAGCCGGAGGATGCAGTGTTATGTCCGGTTTGCCGTGGTAATTGCAACTGCAGAGCATGCTTGCGATCTACAGAATTAAGTGAGGCAATGAGGCGTCGTCGTGTGCCAAGGAACGAACAGGAGAGATTTGAGCATTCTAAGTATTTGCTAAAACGGCTTCTTCCTTATTTAAGACAGTTGGATAAAGAACAAATGATTGAGAAGGATATAGAAGCTAAGAGGAAAGGGCTTTCACTCCCAAAGCTAAATATTGAAAAGTCAGAATACCGTCAAGATGAACGTGTCCACTGTGATAACTGCAAGACGTCAATATTTGACTACCACAGATTCTGTAGAAAATGTTCTTTTCACCTTTGTCTTATCTGTTGCTATGAGCTTCGCAATGGAGAGCTACTAGGTGGTGCAGATCCAGATGAGCTTGGATTTGTCAACTGGGGTATTGATTATCAGCATGGTTGTGATATAAGTAGAGACAAGTCGAATTCAGCACATGAGGATGCTAAGCCTGACTCTAAGAAGAATTTAGCGCATTCTGATGCTAAGCCTGATGTTCGTGGATGGTCAAGATCGGGGTGGCATGCAAAGAGCGATGGCCGCATTCCTTGCCCAAAGAATACGTGTCGCAACAGGTTTCTTGAACTGAGAAGTGTACTTGGTCCAAATTTTATCTCAGAGTTAGTACACAAAGCAGAAGAAGCAGAAGCACATAAGCTTCACACTGCAGTTGAGAATCCTGTTAGCTGGTGTTCATGTTTGAGGCTCAGCAGAAACACAGATTGTAGAAGCAATAATAATACACTGAAGTCAGCTTCTCGTGAAAATTCCATTGACAACTTTTTGTACCATCCTCGGGCTATAAGTCAAAAACCTGAAGAGTTGAAACATTTTCAATGTCATTGGAGTAGAGGCGAGCCTGTTATTGTAAGCAATGTGCTTGAACATTCATCTGGTTTAAGCTGGGAACCACGAGTCATGTGGCGTGCATTCCGATCGTTTAAGGGCAAGGGTAATCAACATTTGGATATGAAGGCACTTGACTGCCTAAATTGGGCACAGGGAGATATTAATATCCATCAATTCTTTTGTGGGTACGAAATTGGTCGTTGGGATAGGTGTGGTTGGCCTCAGATGCTGAGATTAAATGATTGGCCTCCTGATTTCACGGAACGTGCACCACGTCACTATGCAGAATTTATGTCTTTATTGCCCTTTGGGGAATATACACATCCTTTTGGAGGTGTTCTTAATCTTGCTTCTAAAGTACATGGGACTGGTTCAACACCTAACATGGAGCCAAAAGAATATATTGCATATGGATTTCCTCAAGAGCTTGGACGTGGTGATTCTGTGGTTAAACTCCACTATGATATTTCTGATACAGTTAATATTTTAACTCATACTGCTGAAAAAGTGAGGTTGACATCTGACCAACTTAGAACGATTGAGCATTTGAAACGGAAGCACCATGACCAAGACAAGAGAGAGCTCCTTGTAACTTATCAGGAAGAAAGCAATATATTAGCTGGAGGGGATGCTTCTGATGGTGTCCTTTGGGATGTTTTCCGGAGACAGGATATTCCTGTGTTAAAGGAATATCTGAAAAAGCATTTCAAGGAGTTCAGACATAACTATTGCTGTCCCTTAAATAAGGTTATTCACCCCATTCATGATCAAACGATCTATCTGACTGTGGGACATAAGAGGAAGCTAAAGGAGGAGTATGGAATTGAGCCCTGGACTTTCATTCAGAAGTTAGGAGATGCTGTCTTTATTCCAGCGGGATGTCCATACCAAGTTAGAAATCTGAAGACATGCATCAATGTTGCGCTTAGTTTTGTGTCTCCTGAAAGTGTTGGCGAGTGTTTTCGTTTGGCAGAGGAAATCCGCACACTTCCGATAAATCATAGGTCGAGCGAGGACAAGTTGGAGGTGAAGAAAATGACAATATTTGCTATAAATGATGTCCTTGAAAACTTGTCAAGAGCAAGCTTGAATGAAAATCTGAAACCTGAAAGGAATATCCAAGAAAAGCAGCCGACCGGAGAAAAGGATAAATGGGACGAGTATACAACCGGAGTTTTCTTGGACGTATGTGTTGAGGAAATAGCTTCAGGGAATAGAGCTGACGCTGACTTCAATGAAGAGGGATGGATTAATGTGATTGCTAAGTTCAATGGAAAAACAGGTCGTAACTATGACTGCAGGCAATTGAAAGATAAATGGGACATTTTGAAAGGTGACTTTAATTTATGGGAAAAGCTTCTTGAAATTGGTGTGGGATGGGATCCTGTTAAAAAAACCATAAAAGCATCTCAAGAGTTTTGGGTAGCTAGAAGAAAGGAGAACCCAGAATTTCTGAAATTTAGGTTTCAATGTCCTTCACACTTGGATAAGTTGGAAGCATGTTTTAAAGATACGAAGGCTACAGGTGATGTAGCTTTGAAAACACATGCAGATCCATCATCAGCTGAGGTGAGGGTATGTGGGAAAGAAAATGAGGACAATCATGAATTAGGGGCTTTTGGTGAGGGTGTTAGGGACAGTGATAGTGTTGCTTATGAAGAACCTCATACTTCATATAGTGGTGGCCACACTACTTCAAATGATAATCCAAATAAAAGGCAGATACAGCTAAATGATAAAAAACAATTTGGTAAAGTCAATAAGCTTCAACATTCTGTTAGCGTGTCTTTGGAGGAAGAGGAACATAGCATCCCTCTGGAAGTGACACATAGAAGAGCTCCTCAAGAGAATCAGCCAATTCCAGACAATGATAAATGGGATGATTTCACAATAGGAGTTTTCTTGGAAGTATGTATTCAGGAAATAGCTGCTGGGAATAGGCCTCATGATGACTTTAACAAAGAGGGATGGAACAATGTGGTTGCCAAGTTTAATGGAAAAACTGGTCAAAATTATGATCATAGGCAATTGAAAAAGGAACTGGACAATCTAAAAAATGATTTTACTTTATGGGCAAAGCTTGTTGAAAATCAAACTGGTTTAGGATGGGATCCTATTAAAAAAACTGTCAAAGCACCTCCCAGATTTTGGGAATCCAGAAAAAAGGAGAACCCTGCATTTCTAAAGTTTGAGCATCAAGGTCCTCCACACTTAGATAAGTTGGAAGCTTGCTTTGAAGATGCTAAAGGTACAAGTTATGTAGCTATATATGCAGATCCATCATCAAATGGGGTGGGTTTTTATGGTGAAGAGAATGAGGATAATCTTGAATTAAGGGCTTCCAATGAGGATGATGGGGACAGTGGTGATGTTGCTATTGAAGAAACTCATCATACACAGAATGTGCAGCATAGGGAATATAATGAGAATAATCCTGAATTAAGGGCCTCTGAGGAGGGTTTCAGTGATGATGATGTTGCTATTGAAGAAACTCATCATATGCATAATGTAGAGCCTAGGAAAGAGAATGAGAATAATCCCGAACTAAGGGCTTCCGATGAGGGTGTCAGTAGTGCTGATGTTACCATTAGGGAAGAGAATGAGAATAATCCTGAATCAAGGGCTTTTGATGAGGGTGTCTCCGGCAGTGATGTTGCTATTGACAAAACTCATGATACGCATAATGTGGTACTTAGTGAAGAGAATGAGGATAATCCTGAATTAAGGGCTTCCCATGAAGGGGATGAGCCTGGTCCTTCAAATAGTGTTCCGAAGAAAAGGAAGAGACTGAGGAAAAGACTGAGGAAAGCTAAGAAGCATTCTGGTAAAGCAGTTAAGGCAAAAGCAAATAATACTGCCACTGGTTTTGAATGTAATCTGGATTTGGATAGCTGTCTGACGTTACTTGATAGTGTGCCTGGTCTCGAGAAAGGAAGTACTTTGTACTTCATTGCCTGCAGAGTTCTTACAAAGATTGTTAACAGGCAAACTTTTGTGCATTTGATGCGAGATGATCCTAAGTTGGCATTTGGTTGGCTCAACACTTTTACATTGGAGGACCTAAAGAATTTGACTGGCTGA 4527 0.4151 MLPARKRRGRRPRTTQVVNFGTPKNEVPSDNNVDLDKDAKDDDGATNSSLVQNSKGTRQDRKRKMAKISSNVGTSSRSRAESEEDENGYSTATESELPSDNVELGLDKDSQKDVANGRRFLLRKHPQETPKFIRRGPKFFEEESLMCHQCQRNDKGDVVRCKNCKRKRFCMPCLASWYPELKPEDAVLCPVCRGNCNCRACLRSTELSEAMRRRRVPRNEQERFEHSKYLLKRLLPYLRQLDKEQMIEKDIEAKRKGLSLPKLNIEKSEYRQDERVHCDNCKTSIFDYHRFCRKCSFHLCLICCYELRNGELLGGADPDELGFVNWGIDYQHGCDISRDKSNSAHEDAKPDSKKNLAHSDAKPDVRGWSRSGWHAKSDGRIPCPKNTCRNRFLELRSVLGPNFISELVHKAEEAEAHKLHTAVENPVSWCSCLRLSRNTDCRSNNNTLKSASRENSIDNFLYHPRAISQKPEELKHFQCHWSRGEPVIVSNVLEHSSGLSWEPRVMWRAFRSFKGKGNQHLDMKALDCLNWAQGDINIHQFFCGYEIGRWDRCGWPQMLRLNDWPPDFTERAPRHYAEFMSLLPFGEYTHPFGGVLNLASKVHGTGSTPNMEPKEYIAYGFPQELGRGDSVVKLHYDISDTVNILTHTAEKVRLTSDQLRTIEHLKRKHHDQDKRELLVTYQEESNILAGGDASDGVLWDVFRRQDIPVLKEYLKKHFKEFRHNYCCPLNKVIHPIHDQTIYLTVGHKRKLKEEYGIEPWTFIQKLGDAVFIPAGCPYQVRNLKTCINVALSFVSPESVGECFRLAEEIRTLPINHRSSEDKLEVKKMTIFAINDVLENLSRASLNENLKPERNIQEKQPTGEKDKWDEYTTGVFLDVCVEEIASGNRADADFNEEGWINVIAKFNGKTGRNYDCRQLKDKWDILKGDFNLWEKLLEIGVGWDPVKKTIKASQEFWVARRKENPEFLKFRFQCPSHLDKLEACFKDTKATGDVALKTHADPSSAEVRVCGKENEDNHELGAFGEGVRDSDSVAYEEPHTSYSGGHTTSNDNPNKRQIQLNDKKQFGKVNKLQHSVSVSLEEEEHSIPLEVTHRRAPQENQPIPDNDKWDDFTIGVFLEVCIQEIAAGNRPHDDFNKEGWNNVVAKFNGKTGQNYDHRQLKKELDNLKNDFTLWAKLVENQTGLGWDPIKKTVKAPPRFWESRKKENPAFLKFEHQGPPHLDKLEACFEDAKGTSYVAIYADPSSNGVGFYGEENEDNLELRASNEDDGDSGDVAIEETHHTQNVQHREYNENNPELRASEEGFSDDDVAIEETHHMHNVEPRKENENNPELRASDEGVSSADVTIREENENNPESRAFDEGVSGSDVAIDKTHDTHNVVLSEENEDNPELRASHEGDEPGPSNSVPKKRKRLRKRLRKAKKHSGKAVKAKANNTATGFECNLDLDSCLTLLDSVPGLEKGSTLYFIACRVLTKIVNRQTFVHLMRDDPKLAFGWLNTFTLEDLKNLTG* 1509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2739 1508 Gene3D Cupin 464 819 - -
Amo06g2739 1508 MobiDBLite consensus disorder prediction 1278 1299 - -
Amo06g2739 1508 SUPERFAMILY Clavaminate synthase-like 470 828 - -
Amo06g2739 1508 MobiDBLite consensus disorder prediction 1314 1430 - -
Amo06g2739 1508 Pfam Myb/SANT-like DNA-binding domain 866 956 IPR024752 -
Amo06g2739 1508 Pfam Myb/SANT-like DNA-binding domain 1108 1200 IPR024752 -
Amo06g2739 1508 Pfam JmjC domain, hydroxylase 697 793 IPR003347 -
Amo06g2739 1508 SMART cupin_9 572 810 IPR003347 -
Amo06g2739 1508 MobiDBLite consensus disorder prediction 1314 1331 - -
Amo06g2739 1508 MobiDBLite consensus disorder prediction 339 373 - -
Amo06g2739 1508 MobiDBLite consensus disorder prediction 1 109 - -
Amo06g2739 1508 MobiDBLite consensus disorder prediction 1341 1355 - -
Amo06g2739 1508 MobiDBLite consensus disorder prediction 1366 1405 - -
Amo06g2739 1508 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 39 842 IPR045109 GO:0032454|GO:0033169
Amo06g2739 1508 MobiDBLite consensus disorder prediction 15 29 - -
Amo06g2739 1508 ProSiteProfiles JmjC domain profile. 579 810 IPR003347 -
Amo06g2739 1508 MobiDBLite consensus disorder prediction 30 44 - -
Amo06g2739 1508 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 142 207 IPR018866 -
Amo06g2739 1508 MobiDBLite consensus disorder prediction 1406 1427 - -
Amo06g2739 1508 ProSiteProfiles Zinc finger RING-type profile. 147 193 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2739 Amo-Chr6 91927607 91950977 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Amo06g2739 JmjC 2.8e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2739 K15601 - mnt:21406437 783.867