Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2708 ATGGAGCCGCTGCTGAGAGGCGAAGGGAGTGGTGGCCGGAGGGACCACGCGCGGGGGATATTCCGCCGCTCCGACGCCATCACCTACGGCTCCAACTATGAGAAAGCTGCTGCACTCGTCGATCTGGCTGAAGATGGTGTTGGACTCCCTGAGCAAATTCTTGATTCTTCAAGCTTTCAAAGTTCTTCAAGATATTATTTCATTTTCATTAAATGCAATATCATGTGGTCTCTTGCTTATTTTGCTTTGATAGTCCTAAATTTCTTGGAGAGACCTCTGTGGTGTGAAAATTATACCAAACCATCTTGCAGCGATAGAGAGTATTTCTTTCTGGGACAGTTGCCATATCTAACTAATGCAGAATGTCTTATTTATGAGGGATTAACTGTTGTGGTGCTAATCATACATACTTTCTTCCCAATATCATATGAAGGGTCCCGTATATATTGGAGAAACGCAATTAATCTGTTGAAGGTCTTCTGTCTGTTAGTTCTCATTGCTGATATGCTGGTTTATGCTATTTACTTGTCTCCAGCGGCTTTTGATTTTCTACCTTTCAGAGTTGCTCCTTATATCAGGGTTATTCTTTTCATTCTGAATATTAGGGAGTTACGTGAAACCATCACTATCTTGAGTGGCATGGTTGGCACATACTTGAATGTCTTGGCTCTGGGGCTTCTGTTTCTTCTTTTTGCAAGTTGGGTGGCTTATGTGATGTTTGAGGATACGATACAAGGAAAAACAGTATTCACTTCTTATGGTGCTACATTGTATCAGATATTTGTTTTATTTACTACATCGAATAATCCAGATGTTTGGGTGCCTGCATACAAGGCTTCACGTTGGTATTGCCTGTACTTCATTATATTTGTTCTTTTGGGGGTTTACTTCGTTACAAACTTGGTCCTTGCCGTTGTTTATGATAGTTTCAAGAGTGAGCTTGTGAAACAAGTTTTCGAGATGGATCGTATGAGAAGAGCAATGTTGGAGAAAGCTTTTAATCTCTTAGATACTCATAGTACTGGATATCTTAACAAAGATCAATGCATTAGGCTCTTTGAGGAGTTGAACAAATACAGGACTTTACCCAAGATCACCAAGGAAGAATTTGAGTTAATATTTGATGAGCTTGATGATAGTCGTGACGTAAAGCTCAATAAGGATGAATTTGCTGATATTTGCCATGCCATTGCTTTAAAATTCCAGAAGGAGGATTCTATCTCTTACTTTGAGTATTTACCATTCTACAATTCACCCACCTCAAAGCAATTGAAAGAATTTGTGAAGAGACCCATCTTTGGATACCTAGTCTCTTTTCTTCTCGTACTCAATCTAGTTGCAGTTATTATTGAGACAACGCTTGATATACAAAATAATTCTGGTCAAAAGGTGTGGCAAGTGGTTGAGTTCATTTTTGGGTGGATATATGTAATAGAAATGGCTCTGAAGGTTTATGCATATGGATTTGAGAACTATTGGCGGGATGGTCAAAATCGCTTTGATTTTGTTATCACTTGGATAATTGTCATTGGAGAAACTATAACTTTTGCTTCGCCTGATGATCAGACTTTCTTCTCGAATGGAGAATGGATCCGTTACCTTCTTCTGGCAAGAATGTTGAGGTTGATAAGGCTCCTAATGCATGTCAAGCAATTCCGAGGCTTTGTTGCAACTTTCTTAACGCTGTTGCCAAGTTTGACGCCATACTTTGGGATCATATTTTGTGTCTTATGTATTTATTGCTCGGTTGGTGTACAGATTTTTGGTGGACTTGTTAATGCTGGAAACCCTAAATTGCTAGCATCAGATCTTGCTGATAATGACTATTTGCTATTTAATTTCAATGATTATCCTAATGGAATGGTGACACTTTTCAATTTGGTAGTCATGGGGAACTGGCAAGTATGGATGCAGAGCTACAAGGAGTTAACGGGTACTTCTTGGACCTACGTATACTTCATAAGTTTCTACTTAGTCACGGTTTTGCTACTTTTGAACTTGGTTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTTGAGTCACCGGACACCTGTGATGAACAGGACAAGGAAGTTGAAGGAGATAAATATCGAAGACGATCAGTTGGCACAAAATCACGAAGCCAGAGAGTTGATGCTCTTCTTCATCATATGTTGAGCTCTGAGTTGTGTCAAAGTCAAACACAGCCTTCCAATTCATAG 2211 0.3957 MEPLLRGEGSGGRRDHARGIFRRSDAITYGSNYEKAAALVDLAEDGVGLPEQILDSSSFQSSSRYYFIFIKCNIMWSLAYFALIVLNFLERPLWCENYTKPSCSDREYFFLGQLPYLTNAECLIYEGLTVVVLIIHTFFPISYEGSRIYWRNAINLLKVFCLLVLIADMLVYAIYLSPAAFDFLPFRVAPYIRVILFILNIRELRETITILSGMVGTYLNVLALGLLFLLFASWVAYVMFEDTIQGKTVFTSYGATLYQIFVLFTTSNNPDVWVPAYKASRWYCLYFIIFVLLGVYFVTNLVLAVVYDSFKSELVKQVFEMDRMRRAMLEKAFNLLDTHSTGYLNKDQCIRLFEELNKYRTLPKITKEEFELIFDELDDSRDVKLNKDEFADICHAIALKFQKEDSISYFEYLPFYNSPTSKQLKEFVKRPIFGYLVSFLLVLNLVAVIIETTLDIQNNSGQKVWQVVEFIFGWIYVIEMALKVYAYGFENYWRDGQNRFDFVITWIIVIGETITFASPDDQTFFSNGEWIRYLLLARMLRLIRLLMHVKQFRGFVATFLTLLPSLTPYFGIIFCVLCIYCSVGVQIFGGLVNAGNPKLLASDLADNDYLLFNFNDYPNGMVTLFNLVVMGNWQVWMQSYKELTGTSWTYVYFISFYLVTVLLLLNLVVAFVLEAFFAEMELESPDTCDEQDKEVEGDKYRRRSVGTKSRSQRVDALLHHMLSSELCQSQTQPSNS* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2708 736 Pfam EF-hand domain pair 329 393 IPR002048 GO:0005509
Amo06g2708 736 SUPERFAMILY EF-hand 314 397 IPR011992 -
Amo06g2708 736 SUPERFAMILY Voltage-gated potassium channels 430 676 - -
Amo06g2708 736 SMART efh_1 369 397 IPR002048 GO:0005509
Amo06g2708 736 SMART efh_1 328 356 IPR002048 GO:0005509
Amo06g2708 736 MobiDBLite consensus disorder prediction 687 712 - -
Amo06g2708 736 CDD EFh 328 393 IPR002048 GO:0005509
Amo06g2708 736 MobiDBLite consensus disorder prediction 692 712 - -
Amo06g2708 736 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Amo06g2708 736 Gene3D - 203 310 - -
Amo06g2708 736 Gene3D - 422 555 IPR027359 -
Amo06g2708 736 Pfam Ion transport protein 431 677 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Amo06g2708 736 Pfam Ion transport protein 76 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Amo06g2708 736 ProSiteProfiles EF-hand calcium-binding domain profile. 324 359 IPR002048 GO:0005509
Amo06g2708 736 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 2 731 IPR044581 GO:0005245
Amo06g2708 736 Gene3D - 311 394 - -
Amo06g2708 736 Gene3D - 556 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2708 Amo-Chr6 91531426 91543785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2708 2 736 Ion Channels AT4G03560 67.436 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2708 K16900 - gmx:100806160 1155.2