Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2706 ATGGCGTCTGCATCATCCGGTCGCGGCTCCAAGGGCTTCGATTTCGCTTCCGACGACATCCTCTGCTCCTACGAAGACTTTCCTAACCAGGACTCTTCTAACGGCACTCACGATGACCCCGCCAAGGATTTTCACAAATCAAGGATGGCAAGGACATCAATATTTCCTGATACTGCTTATAATTCGCCTGAAGATTCTATAAGCCAAGATGTGATTGCAGCTGTTGAGAAGAGCATGAAAAAAAATGCTGACAACCTTATGCGGTTTCTTGAAGGAATTAGTTCAAGGCTATCACAGTTGGAATTATATTGTTACAATATTGACAAATCAATTGGAGAAATGCGATCTGATTTAAACACTGACCACGGGGAGGCAGAGTTAAAGCTCAATTCTCTTGAGAAACACATTCAGGAAGTACACAGATCTGTACAGATTTTGAGAGACAAGCAAGAGCTAGCTGATACTCAGAAGGAGTTAGCCAAGCTTCAGTTAGTTCAGAAAGAATCATCCTCCACAAGCCATTCACATTCCAACGAGGAGAGGTCTTCACCTTCTGCCACTGATCCAAAAAGAACTGATAAGGCATCTGACGCACATAACCAGCAGTTAGCTCTTGCCCTGCCTCATCAAGTTGCCCCACAGCAACAGCCTGTGGCACCTCCCCCAGCCCCAGCCCCTGCCCCAGCTCCGGCCCCAAATGTAGCACCAGCCACTCAACAATCATCTTATTACATGCCACCCACTCCTTTGCCCAATCTGCCATCTGTGGCCCAAGTTCCCCAGAATCAATATTTGCCCTCTGATCAGCAGTATAGAACTACGCAACCAACATCATCGCAAGCAACACAATCTCTGTCTATGCAACAATATTCTCAGTATCAGCAACCACAGCTGCCACAGCCGCAGCAGCAGTGGCCTCAGCAGGTGCAACCTCCGCAACCACCTCCAATGCAGTCACAGATGAGACCCCCTTCAACCAATGTTTACGCTCCTTACCTGCCAAACCATGCTACAAATCCCTCTCCCTCGGAAACACTACCAAACAGCATGCCAATGCAAATGCCATATTCCGGAATTCCACCTGCAGCTTCCGGCAGTAGCGATGCCATGCCGTATGGATACAGCGGATCTGGTAGAACAGGTCCGCAGCAACCACTTCCGCCGCAAATCAAGAGCTCTTTTCCAGGACAACCAGGTGATCCATATGGAACAAGTGCTACTCATGCCGCGCCCCCTCCTACTAGTGCATACATGATCTATGATAGTGAGGGAGGAAGAACACATCCTCCCCCACAACCACCTCATTTTGCTCAAGCTGGATACCCTCCATCGAGTGCTTCGCTTCAGAACCCTGCACCACATAACCTCATGGTCCGGAATCCTAGCCAGACACAGTATATTCGTGGCCATCCCTACAGCGACTTGATCGAGAAGTTGGTGAACATGGGATTTAGAGGTGATCATGTGGCAGGGGTGATCCAGAGGATGGAGGAAAGTGGGCAGCCTGTAGATTTTAACTCGGTACTTGACCGGTTGAATGTGCATAGTTCTGTTGGTCCCCAGAGGGCATGGTCAGGGTAA 1581 0.4915 MASASSGRGSKGFDFASDDILCSYEDFPNQDSSNGTHDDPAKDFHKSRMARTSIFPDTAYNSPEDSISQDVIAAVEKSMKKNADNLMRFLEGISSRLSQLELYCYNIDKSIGEMRSDLNTDHGEAELKLNSLEKHIQEVHRSVQILRDKQELADTQKELAKLQLVQKESSSTSHSHSNEERSSPSATDPKRTDKASDAHNQQLALALPHQVAPQQQPVAPPPAPAPAPAPAPNVAPATQQSSYYMPPTPLPNLPSVAQVPQNQYLPSDQQYRTTQPTSSQATQSLSMQQYSQYQQPQLPQPQQQWPQQVQPPQPPPMQSQMRPPSTNVYAPYLPNHATNPSPSETLPNSMPMQMPYSGIPPAASGSSDAMPYGYSGSGRTGPQQPLPPQIKSSFPGQPGDPYGTSATHAAPPPTSAYMIYDSEGGRTHPPPQPPHFAQAGYPPSSASLQNPAPHNLMVRNPSQTQYIRGHPYSDLIEKLVNMGFRGDHVAGVIQRMEESGQPVDFNSVLDRLNVHSSVGPQRAWSG* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2706 526 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 524 - -
Amo06g2706 526 MobiDBLite consensus disorder prediction 181 197 - -
Amo06g2706 526 MobiDBLite consensus disorder prediction 26 48 - -
Amo06g2706 526 MobiDBLite consensus disorder prediction 164 180 - -
Amo06g2706 526 MobiDBLite consensus disorder prediction 255 304 - -
Amo06g2706 526 MobiDBLite consensus disorder prediction 214 233 - -
Amo06g2706 526 MobiDBLite consensus disorder prediction 305 321 - -
Amo06g2706 526 Pfam UBA-like domain (DUF1421) 472 516 IPR010820 -
Amo06g2706 526 MobiDBLite consensus disorder prediction 164 198 - -
Amo06g2706 526 Coils Coil 129 165 - -
Amo06g2706 526 MobiDBLite consensus disorder prediction 322 352 - -
Amo06g2706 526 MobiDBLite consensus disorder prediction 211 414 - -
Amo06g2706 526 MobiDBLite consensus disorder prediction 370 387 - -
Amo06g2706 526 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2706 Amo-Chr6 91519710 91523560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2706 52 190 Trihelix Transcription Factor Family AT5G14540 34.532 7.05e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2706 - - aip:107610486 864.759