Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2694 ATGCCTCCAAAGAAGAAGAACAACACTTCTTCTTCTTCTTCTTCTGCGTCCAAGAAGCATAACCCTCAACCTTCCAAGTTCGGCATCCAGCACTTCTTTGATCGCCACACACAGAACAACGCTCTCCTCGCCTCCCAAAAGCTCCAAACTAACAATGCTTCCGATTCCGCCGCTAAACCAGTTTCTGACCCTCTCCCTGCCCGAACCAGAGACCCGATTTGCAGCACCGTTGTGCAGAAGTCGGTGGTGCCGGTTGATAATGTGATGGAAGATATTGTGTCTGAGCTGTCCCCAGATATTTCTAAAGCTATGCCGCTTAAGCGCTTCAAATTCTCACCTGGAATGACTCAAGATTATGGGGTTGATGAGGTCACATGGAAGATATCTCCAGTGAACGAAAGACTCCAAGCTGTTTCTAAACATGTGCCAAATACTTTTCGGGATAAAGATGACAAGGTTGACGAATTGCTTACTTCACCAACTCCCAAGGCTTCTGCAAAAGCTCTACCTTCAATGAGTAAATTAGGCTTGAAAAGGATAAATCCAGAACAAAGTGTGGATTTTGTACACCAATCCAAAATTACTCTGAGCTACTCTGGAGTATCTAGCAGACAGAGTCCCTTCAGGACTCCACCCTCTTTGTCTCATTGTCCCGATAAGGTGCATCCTATTAATGACATTCAATGCACTGGACCATCTGATCAACTTTATCTCAGACAGCACAAAAAGACTTTGCTTGAACTGTTAGATCAAGTTGAAGATGCCATTGCTGTTGATGACGCTACTGTTTGTAACAAGGGAACTGATTCTTTAAAATGTTGTGACGGCATTGCTGATGAGCTCCCTGTTAGAGCCAACCATGCTGATGAAAGAACAAGATCACATAGATCTAAAGAGGATATGGTTGCTGACTCTAGTTATCTGGTTTTGCAGGTGTCTGAAAATTCTAGGTCTGCTGATTCATCTGCTGCTGATGCTCGATCCCCATACAAGGTGCTTCGCTTACTAAATGAGCAAACTGGAGAGGAGCGGGTTGTAAACTTGAGGGATGAGTGGTTTTTCAGTGTAATTGCACCTGGAGATACTGTAAACATAATCGGTCAATTTGATGAAGGAGGAAGTTGTGATATAGGCCATGAAAATAATTTCTTGATTGTGCACCCAGACATTCTGCTGTCTGGAACAAGGGCTGGGCTCACAGAAGACAATCCATCTATTGACTTCTTGGAAGGTTACACAGAAGTGGTATTACTTAGGAACATTGAGAGTCTGTATGCTTGTGGAGTAAATGAAAGTGATGTTCGGAAAACCTTGATTGATGCTGTCCCGAGAATATTGAGTTGGATTTTACGGTTCACAAATAAGGAGGTAATTGATATTGAAGAGATGGCATGGGCTCCTAAATATGGTTTGAAAGGGATGATTGATGCTTCAGTCAGAGTGACAGTACAATCAGTAAAAGATGAACTGGAGGAGAAGATTATGCCAGTAGAGTTCAAAACCGGGAAATCACCAGCTGGCCAGGCGCGACTTAGATTAATGATATTTTTTACTTACAACTCTTGCATATTGTACCTGCAGTCATCAGCAGAACACAATGCTCAAGTAATCTTATATACTCTTCTGATGTCTGAAAGGTATCAAAACACCATTGATTCTGGTCTTCTATATTATCTCCAATCAGATCAGACACAGGGTATTGTGGCTCAAAGATCTGACTTAGTTGGCCTAATAATGCGACGGAACGAGCTAGCAAGTGATATTCTTAAGGCATTAACCTCGCAACAACTTCCAGCAATGTTAAAGAGTCCTGGCATTTGCAAAGGTTGTCGCCATCTTAATGTTTGTAGCATTTATCACAAGTTACATGGTGGAAGCACAAAAAGCAGTGGATTGGAAGATGTATTTGATTCTCTTACTGACCACCTTACATCTTCCCATTCCAAGTTCCTCTGCCATTGGGATCGGCTGATTGACTTGGAAGCCAAGGAGACTGAGCTTTTAAGGAAAGAGATGTGGCGATCACATAGTTTAAAAGCTCCAAACTGTGGTAGCCTTTCTTCTATTGTTCTCGATGCTTCATATGGAATTCCTCATCAGAAATCTGTCAAAGATAATCGCTTTGTTTATCGTTTTGTAAGACAAGATAATTGTCCCTCTGAAGTTTCTGATGGTGATCATTGTAGTACCTATTCAACAAATTTAGATCTTACACTTGCAAGCGGAGACTATGTGGTTTCCTTTTCAAAACGCTTACGAATTCCTGGAAGATGTTCCACTACACATGATCTCCTTCAACAGGTTTGGAGAATCGACAAGGATGAATTTGTGACTTCATTTGCATCTATGAGGTTTAGTCTTGCACAACTTTTTCTACAAAATGTTCGGAGTACTCATCTGCGGAGGATGATTGTTGATCTTGAGGCTCCTAGGTTTGACTGTGAATCTATAGTCAGTCAGGATCCAGCAATATCATATGTTCGGTCGAAGAAATCTTTGAATGATGATCAATGTAAAGCAATTCTCAAGATACTTGCAGCAAAAGATTATGCGCTTATATTAGGAATGCCTGGAACAGGAAAGACTTCTACTTTGGTTCATGCTGTGAAAGCCTTGCTGGAAAGGGGCTCTTCCATTTTGCTGACAGCCTATACAAACTCTGCAGTTGATAATTTACTCATGAAATTAAAAGCACAGGACATTGATTTTGTTCGGATTGGAAGACCAGAAGCAGTGCATGAGGTGGTCAGAGGACACTGCCTTTCAGCAACAAGTATACAAAATGTTGAAGATATCAAAATAAGGTTAGGTCAAGTCAGAGTTGTTGCAGTTACTTGTCTTGGCATTTCCAGTCCCTTGCTTGCCAACATGAGATTTGATGTATGCATTATGGATGAAGCTGGACAGACAACCTTACCTGTGTCCTTGGGCCCCCTAGCATTTGCTTCAGTGTTTGTACTTGTTGGGGATCATTATCAATTGCCTCCACTTGTCCAGAGCATAGAGGCCCGAGAGAATGGCATGGGGATAAGTTTGTTCTGTAGGCTCTCCGAAACACATCCAGAGGCAATTGCGGAATTACGGAGCCAGTACCGGATGCGTCAAGGCATTATGGACTTGTCAAATGCCTTGATATATGGTGACAGGTTGAGGTGTGGTTCATCTGAAATAGCTAATGCAACACTTGAGTTTTCTAATCTAAACTGTGGCTTGACTTGGCTAGAAGATGTTTTAAATCCAAGCAGGCCAGTGATTTTTATTGATACTGACATGTTACCCGCTTTGGAGGTAAGAGATCAGAAGACTGTCAATAATCCAGTTGAAGCTCACATAATTGCCGAGGTTGCAACGGAATTGGTTAGAAATGGAATTGTAGGAGAGCAGATTGGTGTTATTACCCCCTATAATTCACAGGCAAACCTCATCCGGAAAGCAGCTTCCGAGACTACCATGGAGATACATACCATTGACAAATATCAGGGTAGAGATAAGGATTGCATATTAGTCTCTTTCGTAAGATCTAGTGAAAACCCAACGAACCTTGCTGCTTCTCTTCTCGGAGACTGGCACAGGATAAATGTGGCACTCACTCGCGCTAGGAAAAAGTTGATCATGGTGGGGTCTCGTAGAACTCTTTCAAAGGTTCTGCTACTGAAACTTCTCATTAAGAACGTTGAGGAACAATGTGGAATTATAAGTGTTTCGAAGAAGGATATCGTTCCAAAAGTTTTCAGGGCTAATCTACATCTGGGCCACAAATGTGGAGTCGATTGGAAACGTTAG 3783 0.4208 MPPKKKNNTSSSSSSASKKHNPQPSKFGIQHFFDRHTQNNALLASQKLQTNNASDSAAKPVSDPLPARTRDPICSTVVQKSVVPVDNVMEDIVSELSPDISKAMPLKRFKFSPGMTQDYGVDEVTWKISPVNERLQAVSKHVPNTFRDKDDKVDELLTSPTPKASAKALPSMSKLGLKRINPEQSVDFVHQSKITLSYSGVSSRQSPFRTPPSLSHCPDKVHPINDIQCTGPSDQLYLRQHKKTLLELLDQVEDAIAVDDATVCNKGTDSLKCCDGIADELPVRANHADERTRSHRSKEDMVADSSYLVLQVSENSRSADSSAADARSPYKVLRLLNEQTGEERVVNLRDEWFFSVIAPGDTVNIIGQFDEGGSCDIGHENNFLIVHPDILLSGTRAGLTEDNPSIDFLEGYTEVVLLRNIESLYACGVNESDVRKTLIDAVPRILSWILRFTNKEVIDIEEMAWAPKYGLKGMIDASVRVTVQSVKDELEEKIMPVEFKTGKSPAGQARLRLMIFFTYNSCILYLQSSAEHNAQVILYTLLMSERYQNTIDSGLLYYLQSDQTQGIVAQRSDLVGLIMRRNELASDILKALTSQQLPAMLKSPGICKGCRHLNVCSIYHKLHGGSTKSSGLEDVFDSLTDHLTSSHSKFLCHWDRLIDLEAKETELLRKEMWRSHSLKAPNCGSLSSIVLDASYGIPHQKSVKDNRFVYRFVRQDNCPSEVSDGDHCSTYSTNLDLTLASGDYVVSFSKRLRIPGRCSTTHDLLQQVWRIDKDEFVTSFASMRFSLAQLFLQNVRSTHLRRMIVDLEAPRFDCESIVSQDPAISYVRSKKSLNDDQCKAILKILAAKDYALILGMPGTGKTSTLVHAVKALLERGSSILLTAYTNSAVDNLLMKLKAQDIDFVRIGRPEAVHEVVRGHCLSATSIQNVEDIKIRLGQVRVVAVTCLGISSPLLANMRFDVCIMDEAGQTTLPVSLGPLAFASVFVLVGDHYQLPPLVQSIEARENGMGISLFCRLSETHPEAIAELRSQYRMRQGIMDLSNALIYGDRLRCGSSEIANATLEFSNLNCGLTWLEDVLNPSRPVIFIDTDMLPALEVRDQKTVNNPVEAHIIAEVATELVRNGIVGEQIGVITPYNSQANLIRKAASETTMEIHTIDKYQGRDKDCILVSFVRSSENPTNLAASLLGDWHRINVALTRARKKLIMVGSRRTLSKVLLLKLLIKNVEEQCGIISVSKKDIVPKVFRANLHLGHKCGVDWKR* 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2694 1260 MobiDBLite consensus disorder prediction 32 58 - -
Amo06g2694 1260 PANTHER DNA2/NAM7 HELICASE FAMILY 163 1227 IPR045055 -
Amo06g2694 1260 Pfam AAA domain 1010 1209 IPR041679 -
Amo06g2694 1260 Gene3D - 1031 1239 IPR027417 -
Amo06g2694 1260 Gene3D - 930 1030 IPR027417 -
Amo06g2694 1260 Gene3D - 775 925 IPR027417 -
Amo06g2694 1260 Gene3D - 431 618 IPR011604 -
Amo06g2694 1260 MobiDBLite consensus disorder prediction 1 24 - -
Amo06g2694 1260 MobiDBLite consensus disorder prediction 1 68 - -
Amo06g2694 1260 Pfam AAA domain 936 1000 IPR041677 GO:0004386
Amo06g2694 1260 Pfam AAA domain 833 923 IPR041677 GO:0004386
Amo06g2694 1260 Pfam DNA replication factor Dna2 338 396 IPR014808 -
Amo06g2694 1260 Pfam DNA replication factor Dna2 399 481 IPR014808 -
Amo06g2694 1260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 831 1216 IPR027417 -
Amo06g2694 1260 CDD DEXXQc_DNA2 832 1032 - -
Amo06g2694 1260 CDD SF1_C_Upf1 1033 1211 IPR041679 -
Amo06g2694 1260 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2 163 1227 IPR026851 GO:0017108|GO:0017116|GO:0033567
Amo06g2694 1260 Gene3D - 745 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2694 Amo-Chr6 91105477 91123434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2694 1 974 Core DNA Replication Machinery Family AT1G08840 48.913 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2694 K10742 - gmx:100799415 1513.43