Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2692 ATGTGCTGCAGTTCTCTCCAATTGCTGAGGAGTCAATGGATTACTATAATCAGAAATGATGTGTTGATGGAAAAAGACTTGTTCTGCCCAGTCAGATTAGAAGCTGTGAAACATTTTGGTCCTGGTCCTAGTGTTCCTCACAACCATACCAAGCTTTATGTACGATCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAACAAAGAACAACAAAGAACAACAAAGGACTTAG 231 0.4113 MCCSSLQLLRSQWITIIRNDVLMEKDLFCPVRLEAVKHFGPGPSVPHNHTKLYVRSKGRKFERARGTKNNKEQQRT* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2692 76 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 33 71 - -
Amo06g2692 76 PANTHER 60S RIBOSOMAL PROTEIN L18 33 71 IPR000039 GO:0003735|GO:0005840|GO:0006412
Amo06g2692 76 MobiDBLite consensus disorder prediction 56 76 - -
Amo06g2692 76 Pfam Ribosomal protein 60S L18 and 50S L18e 34 72 IPR021131 -
Amo06g2692 76 Gene3D - 21 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2692 Amo-Chr6 91050190 91050566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2692 34 71 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 68.421 3.14e-15 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2692 K02883 - cpap:110808129 70.8626