Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2687 ATGGCTGGGCAATCAGATCCTGAGCTTTCACTGTTTTCAGCAGAGGAGCTTGAGTTCATTGCTGAGGATGAGATTGTGGACATTGTGCCCAATCTCAAGATGGGTCCTCTTAATTTCATCTCTGGAGATTTTGGCCCATTTATCCCACAGATTGTTGCCCAAGTACCGCTTTGGCTGGCTGTTGCATTAAAAAAGAGGGGCAAGTGCTCCATTTGCCCTCCTCAATGGATGTGTGTTGAGAACTTGACTCAAGTTTTGGAAGCTGAGCGAAACTCGCAAGAAATGTCAGAGCAACTGCCATTTCACTATGTAGAAATTTCTAGACTTCTGTTTGACCATGCAAATGATGACATCTCGGATGCATATATGGTGAGATCTCTAATTGAGGACATCAGAGATGTACGATTTCATAAGGTTGAAACTGACCTGGAGGCATTCAATGGTCGCACAATTGCTGTTAAGAGGCAACTGCGAAGATAA 480 0.4396 MAGQSDPELSLFSAEELEFIAEDEIVDIVPNLKMGPLNFISGDFGPFIPQIVAQVPLWLAVALKKRGKCSICPPQWMCVENLTQVLEAERNSQEMSEQLPFHYVEISRLLFDHANDDISDAYMVRSLIEDIRDVRFHKVETDLEAFNGRTIAVKRQLRR* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2687 159 PIRSF GINS_PSF2 2 158 IPR007257 GO:0005634|GO:0006260
Amo06g2687 159 Gene3D - 12 77 - -
Amo06g2687 159 SUPERFAMILY PriA/YqbF domain 12 71 - -
Amo06g2687 159 Gene3D - 78 158 - -
Amo06g2687 159 CDD GINS_A_psf2 66 148 - -
Amo06g2687 159 SUPERFAMILY GINS helical bundle-like 73 148 IPR036224 -
Amo06g2687 159 Pfam GINS complex protein 54 148 IPR021151 -
Amo06g2687 159 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 154 IPR007257 GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2687 Amo-Chr6 90863923 90871326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2687 1 146 Core DNA Replication Machinery Family AT3G12530 71.233 2.29e-76 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2687 K10733 - gmx:100780528 271.552