Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2630 AGGATGGGGTTCTTGGCATTCTTGAAGAGCAAGAAGAAAAAGATTGATGAAATGATGTTGAGGAATCGAATCAACCGTATCGAGCGTGTAGCTAGGCAGCTAATTGAGCATGGAACACAAGAGTCTTCACCTGCAGCTAGTTTCAGTGTTTCTGCTCCCTCGCCTGGTAGCGAAGCAGAAGAAGATGGTTCGGCCTCAGTTACACATGAACAACAACAACAACAACAACCAAAGCGTGAACAGGGATCAATGAAGGATCACTTTCCAACAAATCCACAACCCGTTCCGCTTCCATGTCCTCCTCCTCAGCATGCTTCTGGATCTTCGCTGCTTTCGCATAGCGCTTCGCTTCGATACTTCCTTTACGACGAAATCGCAGCTGCTTGCGACAATTTCTCTTCCGATCGATGTGTGTCGGACACACACTGTGTTTTGTCAAGCAGTTACAAAGCTTCCTTTGGTGATGATTCTTCAAGAAAGCTCCAAGCTACTGGCTTGAAGGAATTCATTAATGAAGTTAATACTCTTGCATCTTTGCAACATCCAAACATTTGTAGGTTGCTTGGATTTCATGCACGTGACAGCTCAGAACCGAGGATGTTGGTGTATGAAAGGCTACACCTTGGAAGCTTGGATCGCTTGCTATTTTACGGTACATCTGATTACCCAACTCTCGATTGGAATTCAAGATTGAAAATTGCCATTTGTGCTGCACAAGGTCTTACTTTCTTGCATGATGAAGGGCCCTTCCAGGCAACGTACAACGAATTTTCAACAGCCAACATACAGGTTGAAAAGGATTTCAGTGCAAAGCTTTCAGGGTATGGTTGCGTAGTCGGGCGAGTTTCGGAGGAAGCTATTAGAAACATGTCAATGGAAACATTCGAAAGAGGAATACTTACTCCGAAGAGCAATGTATGGAGTTTTGGAATCATTCTTCTGGAGCTGCTTACCGGTATAAGGAATGTGGATAGCCGCCATCCAAATGTAGACAAGAACATAGTCAAGTGGAGCTGGCCATTCCTAAACGATGAATTCCGACTGTCCATGATCATGGATCCTAAGCTCAAAGGCCACTATCCTCTAAAAGCAGCGAGGATGTTGGCTGACATTGCGCATCGATGTCTCCAGAAGGAGCCATCGATACGGCCGACCATGCGAACTGTTGTTAAGCATCTTAAGATGATACAAGAGATGAAGTTCTCACCCCAAGAGCTAGTGACAATCCCTCTTGGGAAAAGCGTCCCTCTACCGCCACCACCGGAAGCTAGGACTAGATTGAGTGCCTTTCCGCTATCACAGCCGACAAGAAAGCCTATACCGAGTTTCAATTTGTCATCTCCATCCGATGCCCCCAAGCAACATGTTTCGCCTCCTAAATGGTCTGACGCACCCGCCACGCTTTCCCCACACCCTTGGCCTTCCATACAATTTATGGAGAAGGTTGTTAGGCAAGAAAGCAGGCATGGCCAATCATCATCCTAA 1485 0.462 RMGFLAFLKSKKKKIDEMMLRNRINRIERVARQLIEHGTQESSPAASFSVSAPSPGSEAEEDGSASVTHEQQQQQQPKREQGSMKDHFPTNPQPVPLPCPPPQHASGSSLLSHSASLRYFLYDEIAAACDNFSSDRCVSDTHCVLSSSYKASFGDDSSRKLQATGLKEFINEVNTLASLQHPNICRLLGFHARDSSEPRMLVYERLHLGSLDRLLFYGTSDYPTLDWNSRLKIAICAAQGLTFLHDEGPFQATYNEFSTANIQVEKDFSAKLSGYGCVVGRVSEEAIRNMSMETFERGILTPKSNVWSFGIILLELLTGIRNVDSRHPNVDKNIVKWSWPFLNDEFRLSMIMDPKLKGHYPLKAARMLADIAHRCLQKEPSIRPTMRTVVKHLKMIQEMKFSPQELVTIPLGKSVPLPPPPEARTRLSAFPLSQPTRKPIPSFNLSSPSDAPKQHVSPPKWSDAPATLSPHPWPSIQFMEKVVRQESRHGQSSS* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2630 494 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 100 493 - -
Amo06g2630 494 MobiDBLite consensus disorder prediction 429 453 - -
Amo06g2630 494 MobiDBLite consensus disorder prediction 412 475 - -
Amo06g2630 494 Gene3D Phosphorylase Kinase; domain 1 103 204 - -
Amo06g2630 494 MobiDBLite consensus disorder prediction 35 108 - -
Amo06g2630 494 PANTHER OS01G0588500 PROTEIN-RELATED 100 493 - -
Amo06g2630 494 MobiDBLite consensus disorder prediction 36 54 - -
Amo06g2630 494 Pfam Protein tyrosine and serine/threonine kinase 164 393 IPR001245 GO:0004672|GO:0006468
Amo06g2630 494 SUPERFAMILY Protein kinase-like (PK-like) 163 396 IPR011009 -
Amo06g2630 494 Gene3D Transferase(Phosphotransferase) domain 1 207 407 - -
Amo06g2630 494 ProSiteProfiles Protein kinase domain profile. 1 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2630 Amo-Chr6 89883367 89887319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2630 111 418 Glycoside Hydrolase AT3G07070 32.432 1.54e-47 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Amo06g2630 PK_Tyr_Ser-Thr 3.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2630 - - adu:107494894 592.808