Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2628 ATGCAGAAGAGAAGATTGGCTGACATGTTAGGGCTACAATGGAGCAAGGAGGAACTAGAGCATTTCTATAAAGCTTACCGTAAATATGGAAAAGACTGGAAGAAGGTATTGGATCAAGAGAGTGAGATTTTATCGCCAAAGAAATTAGGAAGTAGGTCTTCTAGAACGAGCAACAAGAAAGTATGA 186 0.3925 MQKRRLADMLGLQWSKEELEHFYKAYRKYGKDWKKVLDQESEILSPKKLGSRSSRTSNKKV* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2628 61 SUPERFAMILY Homeodomain-like 13 37 IPR009057 -
Amo06g2628 61 PANTHER LIN-9 2 37 IPR010561 GO:0006351|GO:0017053
Amo06g2628 61 Gene3D - 13 59 - -
Amo06g2628 61 Pfam Myb-like DNA-binding domain 13 52 IPR001005 -
Amo06g2628 61 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 2 37 IPR028306 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2628 Amo-Chr6 89873719 89875558 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo06g2628 Myb_DNA-binding 7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2628 - - adu:107464346 72.0182