Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2584 ATGATTCAGTATGGTAAAGATTATGAATTTGATACTCCAGTGAAGCTCCTAGAGAAACATCTACATGCTATGGCACAATTTGTTGATGAGCAACTTCTTGTTGTTTCTCAGGTTATTGCTTTCAATGATAAGCCTGTGAAGAATTTGAAGGGCTTGGTCACCATGGTTGAGAACTGTGATGATGAGTTTCTAAAGTTTGATCTGGAATACCAACAGGTTCTCTCTCATGGACTCAAAGGTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTAGTAGTGACATTCTTGCAAGGGCTAAAAATGGGACAGGCAAAACAGCTGCATTTTACATTCCTGCATTGGAAAAAAATGACCAGAAATAA 381 0.3832 MIQYGKDYEFDTPVKLLEKHLHAMAQFVDEQLLVVSQVIAFNDKPVKNLKGLVTMVENCDDEFLKFDLEYQQVLSHGLKGFERPSPIQEESIPIALTSSDILARAKNGTGKTAAFYIPALEKNDQK* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2584 126 Pfam PDZ domain 37 73 IPR041517 -
Amo06g2584 126 PANTHER - 3 74 - -
Amo06g2584 126 Gene3D - 36 76 IPR046449 -
Amo06g2584 126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 122 IPR027417 -
Amo06g2584 126 Pfam DEAD/DEAH box helicase 86 122 IPR011545 GO:0003676|GO:0005524
Amo06g2584 126 PANTHER DEGP PROTEASE 9-RELATED 3 74 - -
Amo06g2584 126 Gene3D - 77 125 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2584 Amo-Chr6 89133958 89138435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2584 80 122 Eukaryotic Initiation Factors Gene Family AT5G11200 46.512 4.21e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2584 K25897 - ahf:112717194 214.157