Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2565 ATGGAGTCAGCTGTTGATGAAATTGAGTCTTTGCCAGAGGTTCAGAATTCAGTTTCTGGGGTAGATCATGATCCTCCTTCGACATCTGGGACTCCGAATTCGACCGCTCCTCATACTTTCGGCCTCAATGACACAGTTGAGAGTTGCTTAGCGAAGAACATTGTCACAATGGAAAAGAAATTGTGCATCAAACCAAAGTTTGAAGATGCCAAGAATTATGATTTGAGCAGCCAAATGGAATCTGGGAAACACAAATCTGGTGCATTGAATGGAGTTGCTGATCAATCGGAGATTACTTGTTGTCCGAGCCCTCAGAATAGTTTCTATTCAGAAGCCAAACAAAGCTCTACAATTGCTGGAGTGAGTGAATGTGTAAGTGTTGATAAGTCTGTTGAAAGCGGAGAAGCTGTGAATTCGGTCGAATTCAACGAGAGCAGGAAGAGCAGCATCTGTAGAGGGAGTACAGGAAGTGATGTTAGTGATGAGAGCAGCACCAGTAGCTTCAGTAGTGCTTTGTATAAACCCCATAAGGCAAATGATATAAGATGGGAAGCAATTCAAGCTGTCCGAGCTCGGGATGGAGCTTTGGAAATGAGGCATTTCAGGTTGTTGAAGAAATTGGGGTGTGGAGACATAGGAAGTGCATATCTAGCTGAGTTAGGTGGCACAAGGGCTTGTTTTGCTATGAAAGTAATGAACAAAACGGAGCTGGCGAATCGCAATAAGCTCCAGAGGGCTCAAACGGAGAGAGAGATATTGCAGTCTCTTGATCATCCTTTTTTACCAACTTTGTATACTCACTTTGAGACAGAGACATTCTCTTGCTTGGTAATGGAGTTTTGCCCCGGCGGGGATCTGCATGCACTCAGACAAAGACAGCCGGGGAAGTATTTTTCCGAGCATGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATCATCTACAGAGACCTTAAACCGGAAAACGTGTTGGTGAGGGAAGACGGTCATATAATGCTGTCGGACTTCGATCTCTCTCTAAGGTGTGCAGTCAGTCCTACTGTTGTAAAGTCCACAAACTCTTTCTTGGAAATGAAAACCTCAGGATATTGTGTTCAGCCGGCCTGCATTGAGCCGACTTGCGTGATGCAGCCTGACTGCATCCAGCCTTCATGTTTTACGCCGCGCTTCCTTAGAGGGAAGTCGAAGAAGAAAGAAAAGAAGTCAAAACAAAAGAATGATGTGCATAATCAGGTGACCCCTCTCCCTGAGCTCATCGCCGAGCCCACGAATGCGAGATCAATGTCATTTGTAGGAACACACGAATACTTGGCACCCGAAATAATCAAAGGTGAAGGACATGGTAGTGCTGTAGACTGGTGGACGTTTGGGATATTCTTGTATGAGCTTTTGTTTGGTAGAACACCATTCAAAGGCTCAGCAAACAGAGCAACTCTGTTTAATGTTGTTGGCCAGCCCTTAAGGTTCCCAGAAACCCCTACAGTAAGCTTTGCAGCCAGGGACTTAATCCGGGGTTTACTCGTGAAAGAGCCGCAGAATCGGCTGGCCTATCGACGCGGAGCGACAGAAATAAAACAGCATCCGTTCTTTCATAATGTTAACTGGGCGCTGATCCGCTGTGCGAGTCCTCCAGAGGTGCCAAGGCAGGCCATGAAGGCCCTCGCAGCGGAAAAGCCGCCTGGTGTCAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 1752 0.4618 MESAVDEIESLPEVQNSVSGVDHDPPSTSGTPNSTAPHTFGLNDTVESCLAKNIVTMEKKLCIKPKFEDAKNYDLSSQMESGKHKSGALNGVADQSEITCCPSPQNSFYSEAKQSSTIAGVSECVSVDKSVESGEAVNSVEFNESRKSSICRGSTGSDVSDESSTSSFSSALYKPHKANDIRWEAIQAVRARDGALEMRHFRLLKKLGCGDIGSAYLAELGGTRACFAMKVMNKTELANRNKLQRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSTNSFLEMKTSGYCVQPACIEPTCVMQPDCIQPSCFTPRFLRGKSKKKEKKSKQKNDVHNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPETPTVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNVNWALIRCASPPEVPRQAMKALAAEKPPGVKPSGNYLDIDFF* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2565 583 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 50 583 - -
Amo06g2565 583 Gene3D Transferase(Phosphotransferase) domain 1 433 557 - -
Amo06g2565 583 SUPERFAMILY Protein kinase-like (PK-like) 179 558 IPR011009 -
Amo06g2565 583 CDD STKc_phototropin_like 199 559 - -
Amo06g2565 583 ProSiteProfiles Protein kinase domain profile. 201 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2565 583 MobiDBLite consensus disorder prediction 10 39 - -
Amo06g2565 583 Pfam Protein kinase domain 436 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2565 583 Pfam Protein kinase domain 202 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2565 583 PANTHER FLIPPASE KINASE 1-RELATED 50 583 - -
Amo06g2565 583 SMART serkin_6 201 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo06g2565 583 Gene3D Phosphorylase Kinase; domain 1 199 284 - -
Amo06g2565 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 322 334 IPR008271 GO:0004672|GO:0006468
Amo06g2565 583 Gene3D Transferase(Phosphotransferase) domain 1 285 361 - -
Amo06g2565 583 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2565 Amo-Chr6 88931734 88935726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2565 105 583 AGC Kinase Gene Family AT5G47750 70.825 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Amo06g2565 Pkinase 8.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2565 K08286 - gmx:100802402 942.184