Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2561 ATGGGAGGATGTTGCAGCCATGAGCTTGGTATTCGAGAGAAGGTTGAGAGCGATTTGGGAGATGAACATGAGCTTGATTATGAGGGCAATGATATAGAATATGGTTATGGTGGTGAAATCATAAGGCTCAAAGGGTGCTCTAGGTTTGTATCAATGTATTGCCAACAGGGTAAGAAAGGTGTCAATCAAGATTCTATGACTGTTTGGGAGGACTATACAGGAGAAAAAGACATGATGTTCTGTGGTGTTTTTGATGGGCATGGTCCTCTAGGGCACAAAGTATCGCAATATATCCGCGACAATCTACCTTCGAAGCTGTCTGCAGCAATCAAATTGGCACAACAAAAGGCCAACAACTACTATGATGATAGTGATGCAGATACAAGCACGTTTGATGATTCTAACCAGAACATGTCCCTTGCTTCATGGGAGGGATGCTTTATCAAGACATTCAAGGAAATGGATGATTACCTTGCCAAGGACATTAATACCGACAGCTATTGCAGCGGTTGCACCGCCGTTACTGTCATCAGACAGGGTGATCAGCTTATAATCGGAAATTTGGGCGATTCTCGCGCGATTCTTTGTACTAGAGAGAGAGATCAACGTGTTCCTATTCAACTTACCGTGGATTTGAAACCTGATCTTCCAAGTGAAGCTACAAGGATCATGAGCTGTGAAGGCAGAGTTTTCGCGGCAGAGGAAGAACCCGACGTGTGCCGAATATGGATGCCTGATGATGACTGCCCTGGATTAGCTATGTCCAGATCCTTCGGAGACTTTTGCCTCAAAGATTATGGCCTCATCTCAATTCCTGATGTATTTTACAGGAAACTTTCCAAGCAAGATGAATTTGTGGTCTTGGCAAGTGATGGGGTATGGGATGTGCTGAGTAACAATGAAGTTATCAACATAGTTGCTTCAGCACCAAGCAGAAGCGTAGCAGCCAAATTGCTTGTAAAAAGAGCCGTTCGAGCATGGAGATACCGGTATCCCGGCTCCAAGGTAGATGATTGCGCAGTTATATGCTTGTTCCTGGACGGCGAGCAGCCGGTGTTATCCCACTCGCAGTCCAAAAGGGTTGGCAAACATCTCAGCAAACACCCTCATCGCAACCGAACGATGAGCAACGAAGACAACGAGACAGTGGCCGGAAAAGTGGGGGTAGAGCTGAATGTCAATGAAGAATGGAAGGCTCTTGGAGGGTTAGCTAGAGCCAACTCCTTATCAAAACTTCCAAGGCTTACAAGAGATTTGAGTAGAAGGCAAGTATCAACTAGGTTCATTCAAGGGAGCTGA 1299 0.455 MGGCCSHELGIREKVESDLGDEHELDYEGNDIEYGYGGEIIRLKGCSRFVSMYCQQGKKGVNQDSMTVWEDYTGEKDMMFCGVFDGHGPLGHKVSQYIRDNLPSKLSAAIKLAQQKANNYYDDSDADTSTFDDSNQNMSLASWEGCFIKTFKEMDDYLAKDINTDSYCSGCTAVTVIRQGDQLIIGNLGDSRAILCTRERDQRVPIQLTVDLKPDLPSEATRIMSCEGRVFAAEEEPDVCRIWMPDDDCPGLAMSRSFGDFCLKDYGLISIPDVFYRKLSKQDEFVVLASDGVWDVLSNNEVINIVASAPSRSVAAKLLVKRAVRAWRYRYPGSKVDDCAVICLFLDGEQPVLSHSQSKRVGKHLSKHPHRNRTMSNEDNETVAGKVGVELNVNEEWKALGGLARANSLSKLPRLTRDLSRRQVSTRFIQGS* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2561 432 SMART PP2C_4 39 344 IPR001932 -
Amo06g2561 432 CDD PP2Cc 48 346 IPR001932 -
Amo06g2561 432 Pfam Protein phosphatase 2C 74 324 IPR001932 -
Amo06g2561 432 PANTHER ALPHABET, ISOFORM E-RELATED 1 405 - -
Amo06g2561 432 Gene3D - 44 348 IPR036457 -
Amo06g2561 432 MobiDBLite consensus disorder prediction 357 376 - -
Amo06g2561 432 SUPERFAMILY PP2C-like 46 348 IPR036457 -
Amo06g2561 432 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 405 - -
Amo06g2561 432 ProSiteProfiles PPM-type phosphatase domain profile. 49 346 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2561 Amo-Chr6 88878093 88881192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2561 1 378 PP2C-type Phosphatase Gene Family AT5G01700 50.000 2.97e-131 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2561 - - gmx:100783603 665.996