Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2551 ATGCAACCTGAGCATTACTTCTCGGAGAAGTCCTCGTTCCCCGTTGCCGTCGACGAGGACGACAAAGCCACCGAGTTCCGTCCGCTCTCGGCAGCACGACCACACATGCTCACCTTCCACCTGGCATGGCTGAACCTCTTCTCCTGCTTCTTCTCCACTTTTTCCATTCCCCCACTCCTTCCGATCATCCGTGAAGACCTCAAACTCACCGCCGCGGAAATAGGCGCCGCTGGCACCGCCTCCTTTGCGGGCTCCATCTTCTCCCGCCTCCTCATGGGACCCACCTGTGACCTCGTCGGCCCCCGCATAGCCTCTGGCACGCTCTCCCTCCTCACCGCCCCAATCATCCTCGCCACCTCCCTGGCCTCCACACCCACCTCCTTCATCGCCATCCGCTTCCTCGTCGGTTTCTGCCTCGCTAATTTTGTCTCCAGCCAGTTCTGGATGAGCTCCATGTTCTCCGGCAACGTCGTCGGCCTCGCCAACGGCGTTGTTGCAGGCTGGGCCAACGTCGGCTCTGGCGTGACCCAACTCGTCATGCCCGGCGTCTACTCCCTCTTCATCTCACTATTCAACCTCCCTTCCTCCACCGCATGGCGCTTATCATTCATAATCCCGGCAATTTTCCAAGCCACCACCGGAACCTTGGTTTTGTTATACGGTCAAGATCTCCCTTCTAGTAACCACAACACCAAGAGAGGTACTAATCAAAAGGAGAGTGTATTTGTTGTTGTGCTGCGTGGGTTGTCGAATTACAGAGGATGGGTTCTGGGACTGCTGTATGCGTCGTCGTTTGGGGTGGAGCTTACAATGGACAACATAATAGCGGAGTATTTCTATGACAGGTTCGGGGTGAATGTTCAGACGGCGGGAACCATAGCGGCGTGTTTTGGGATGGCGAATGTGTTTTCGAGGCCAATGGGTGGAGTGATGTCTGACAGGATGGGGAAGAGGTTCGGCATGAGAGGGAGGCTTTGGGGGGTGTGGGCGGTTCAGACGGTGGCCGGTTTGCTCTGTGTGTTGCTGGGCCGAGTTGACTCGCTTTGGAGCTCGGTGCTTGTCATGTGCTGCTTTTCAGTGTTTGTTCAAGCTTCTTCTGGCCTCATCTTTGGCGTGGTTCCTTTCGTTTCCAAGAGATCGCTAGGAGTAATAGCAGGAATGACCGGAAGCGGTGGAACGATAGGAGCAGTTGTGACGCAAATGGTGTTGTTCTCAAGCGGCAACTTATCTAAACAGACAAGTATATCCGTGATGGGTTTATTCATCATATTTTGTACTCTTCCTATAACTTTGATCTACTTCTCTCGTTGGGGAGGAATGTTTTGTGGTCCGAGCCATGATTCAATCCAGGAAAATTATAGTCTTCTGGAATAA 1374 0.5371 MQPEHYFSEKSSFPVAVDEDDKATEFRPLSAARPHMLTFHLAWLNLFSCFFSTFSIPPLLPIIREDLKLTAAEIGAAGTASFAGSIFSRLLMGPTCDLVGPRIASGTLSLLTAPIILATSLASTPTSFIAIRFLVGFCLANFVSSQFWMSSMFSGNVVGLANGVVAGWANVGSGVTQLVMPGVYSLFISLFNLPSSTAWRLSFIIPAIFQATTGTLVLLYGQDLPSSNHNTKRGTNQKESVFVVVLRGLSNYRGWVLGLLYASSFGVELTMDNIIAEYFYDRFGVNVQTAGTIAACFGMANVFSRPMGGVMSDRMGKRFGMRGRLWGVWAVQTVAGLLCVLLGRVDSLWSSVLVMCCFSVFVQASSGLIFGVVPFVSKRSLGVIAGMTGSGGTIGAVVTQMVLFSSGNLSKQTSISVMGLFIIFCTLPITLIYFSRWGGMFCGPSHDSIQENYSLLE* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2551 457 CDD MFS_NRT2_like 39 431 IPR044772 GO:0015112
Amo06g2551 457 ProSiteProfiles Major facilitator superfamily (MFS) profile. 38 431 IPR020846 GO:0022857
Amo06g2551 457 PANTHER HIGH AFFINITY NITRATE TRANSPORTER 2.7 8 452 - -
Amo06g2551 457 Gene3D MFS general substrate transporter like domains 32 232 IPR036259 -
Amo06g2551 457 SUPERFAMILY MFS general substrate transporter 19 432 IPR036259 -
Amo06g2551 457 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 8 452 IPR044772 GO:0015112
Amo06g2551 457 Pfam Major Facilitator Superfamily 43 398 IPR011701 GO:0022857|GO:0055085
Amo06g2551 457 Gene3D MFS general substrate transporter like domains 240 440 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2551 Amo-Chr6 88691306 88696833 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2551 1 444 Inorganic Solute Cotransporters AT5G14570 62.151 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2551 K02575 - pvy:116145243 629.017