Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2527 ATGTCCTTCAATCAATCAAAATCCGACAAGAGTGACGCTGTGTACCGAAAATCCGGGCGATCCGCCAGCTTCAATCAGCAGCGAGGCTCCTCCGGCGGTGCATACGGCAGGGGCGGCAGCGGTGGCGGTGCCGCACCTTCTCCGTCACTATCCTCGAGCCGCAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTACCGTAGCAAGTTCAACCGAGTCTAATAGTATTAATGCAAACCGGACCATACCAAATGGTAGCCATGTTCAGCCTCAATTTCATGGAGGATCTGATGCACCAGTTACCAATGCAACTATCAAGTCACCCGAGTCAAATGCTCAGAGAAGCACCAGAGCTATTCCAAAAGCTCCTACTTCTCAACCTCCCACCTTGAGTTCTGATTCAGCTCCTCCGACAACCCCTGCTAAGGGAGATGCATCCAAGGCTTTCCCTTTCCAATTTGGATCTATTAGTCCTGGTTTTATTAACGGAATGGCAATTCCTGCTCGCACAAGCTCAGCTCCACCCAATTTAGATGAGCAGAAGCGTGATCAGGCTCGCCATGATTCTTTTAAACCTCCAGCACCAGCACCAGCACCGGCACCGGCACCGGCACCGGCACCTCCTGTTCCAAAGCAGCACTCAGTGAGGAAGGATATAGGTAATAATGATCAATCTAATGCTGGGACTAGGGCAAAAAAAGATATGCAGTTGTCATCATTGCCTCCAGGAAGCCAGATGCAGAAACCTTCAGTTGTTCCTTTAAGTGGAATTTCAATGGCAATGCCATATCATCAGCCACAGGCATCTGTACAGTTTGGCAGTCCCAATCCGCAGATTCAATCTCAGGGTATGCCAACAGCACCTCTACAGATGCCTTTACCAATGCCTTTGCCAATTGGAAATGCTCCACAAGTGCAGCAACAGGTCTTTGTTCCAGGCCTTCAACCACACCAGATGCATCAAGGACTCATGCATCAGAGCCAAAACATGAGTTTTACTCCTCAACTGAGCCCTCAATTGCCCCATCAGTTAGGTAGCATGGGTATAAGCATTGGCCCACAATATTCCCCACAGCAAGGAGGAAAATTTGCTCCTCGTAAAACTACTCCTGTCAAGATAACTCATCCTGAGACCCATGAGGAGCTTAGGCTTGATAAAAGGGCAGACACATATTCAGATGGTGGGTCATCTGGTGCTAAATCTCATGCTAGTGTGCCTTCTCAGTCTCAACCTGCCCAGCCATTTACAGTTTCTCATCCTATTACTTACTATCAACCCAATTCCTACAGTGCAAGTTCTGGCTTTTATCCACCTGCTAGTTCTCTTCCATTAACAAGTAGTCAGATAACTCCAAATTCTCAACCACCAAGGTTTAGTTATGCAGTGAGCCATGGTCAGCAAAATGTTGGTTTCATGAATTCATCATCTCATAATTCGATACCTGTTAATAAAGTTGGCACTCATATCCCTGCCATTACTGAACCACCTGCTCCAGAATTTTCCCACAATGTGCTTAATGCTATCTCACCATCATCAGGAGCAACATCTATGTCTATTAAAGATAGTAGTGGGACTGGTCTTGTGGACTCCTCAGTTGCCAATTCCAATATTTCTGGTGCCCGAAGGAGTCACTCTGCTAGATCTTCAGTAGCATCTGGTGATGCTAACTCCTCTTTGCCACAAAAAGGTTCTGAAATTTGCTCTGAAGTTTCTTTGGAACAGTCTAAGTTATCCAGTGATTCTTCAGTTTTGAACTCACTGCCAAAACAATCTTCTGCATCTACTGAGGTTACAGCTGCTCCTTTGAAGTCTTCCTCTGCTGTGAGTGCTGAGTCTGTTTCAGTTGTGTCTAATGATGAAGAAAAGGGGAAGGAATTTCTCAGTAGGTCAAATTCTTTGAAAGATAATCAGAAGGTACAGAAGAAAGGCCAATTACAACATCAGGTTGCCGTACAATCTCCTACTGTAGCTGATGTCCCTTCCCAAGCTGTTGAGAGATCTTCAGTCATATCTGAAACTGTAGGAACTAAAACAAACCATTCTGCCGCAGTGACCAGTGAAGATGTAGCAGCAGCAACAGCTGCGGATGAAGACATGCTATTAACTCCCTCTGTTAGTATGTCTCATGCTGAAGTGAAAAGCAATGGCACTACAGAACTTTCTGTTTGTGTTTCAGCTGAAGGGCCTGTCGCTCAAACTGGCTATAGTTTGAATAACAATGATGAGCTAGATGAATTTTTGCAAGAGGATAAACTGTCAAAGGATAAAGTTTCAGAAATGGGTGAAAAAACTGAAATATCATCTATTCAAGGTTCCAAACAAGAACATGATGAATCTACAAGCTGTGTTCCAGAATGTGAAAGGACAAGTGATAGTTTAGTCATGTCTACCTGTAGTGCATTGGGTTCTCCTAGAGATGTCTCATTGAGTAGAGATGATATTGCAGTCAGTAGTGGAGCTGTTTCCGCAAGTTCTGGCACATTAGACCAGCATTCTGCTGATGTTCCAGAAACAACTTCAAAACATTTGAAAGATAGTTTAGAGATTGCTGAAAGTGTGGTTTCTCTTCCAGCGCCAGGTACTAAGGATAGACCAATTTTGGAGCAAAATAAGGTTAAAACTACTAAGGGGAAAAAGAAAAGGAGAGAGATTCTTCAAAAGGCCGATGCTGCTGGATCAACCTCTGATCTTTATAATGCGTACAAGGGACCTGAGGAAAAGAAGGATGCTGTTGTAAGTGCAGAGAAAGAGGACAGCGTTTCTACTTCTGGAAGTTTAGAGCAGTTTTCTACTGGTGCTGCTCAGCGAGATTGTATAACGAGTGAGCATAAAGCTGAGCTTGATGATTGGGAGGATGCTGCTGACATGTCTGCACCAAAACTTGAAGTTTCAGATCAAACTGAACAGGTTACTGACAGTTGTATAGTTACAATGAAAAGGTACTCTCGAGATTTCCTTTTGAAGTTTGCAGAGCAGTGCACAAATCTTCCTGAAGGATTTGAAATCACAGCTGACATAGCTGAGTCTTTGATGGGTGCCAATGTTAGTAGTTCACGTGATCCACATCCTTCTCCTGGAAGGATTATAGATAGGACTGGTGGGATGTCTAGGATAGATCGGCGTGGAGGTGCTATTACTGAGGAAGACAAGTGGAGCAAAGTTTCCAATGCTTTTCATTCAGGTATGCGTTTGGATGGTATTGGAGGTAATGCAGGATTTCGTCCAGTTCAAGGAGGCAATTTCGGTGTCTTAAGGAATCCTCGCTCACCTCTGCCATATGCTGGAGCTGGAGGGATTCTTTCTGGGCCAATGCAATCCATGGGCAATCTGGGAGGAATGCCAAGAAACAGCTCTGACAGTGACAGGTGGCAGCGTGCTTCTAGCTTCCAGCAAAGGGGTTTGATTCCTTCTCCTCAAAGTCCTTTGCAGATGATGCACAAAGCTGATAAGAAGTATGAGGTCGGTAAAGTGACAGATGCGGAAGAGGCCAAGCAGAGGCAATTGAAAGCTATATTGAATAAGTTAACTCCTCAGAATTTTGAGAAGCTTTTTGAGCAGGTAAAAGCAGTTAACATTGACAATGCAGTAACTCTCACTGGTGTCATCTCACAAATATTTGAGAAGGCTTTGATGGAACCTACCTTCTGTGAAATGTATGCCAATTTCTGTTCACATCTGGCAGCTGATTTGCCTGATTTTAGTGAAGACAATGAGAAGATAACTTTTAAGAGGTTATTATTAAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAACAGGAAGAGGCTGACAAGGCTGATGAAGGTGAGATCAAGCTGTCTAATGAAGAAAGGGAGGAGAAAAGAACCAAAGCAAGAAGACGCATGCTGGGTAATATCAGATTGATAGGAGAACTGTATAAGAAGAGAATGTTGACAGAGAGGATTATGCATGAGTGCATCAGGAAGTTATTGGGTCAGCATCAGGATCCGGATGAAGAAGATATTGAAGCTTTGTGCAAGCTCATGAGTACAATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAGCATATAGATGTGTATTTTGAACGGATGAAATCATTATCAAACAACATGAATTTATCTTCAAGGGTGAGGTTCATGTTGAAAGATGCCATTGATTTAAGAAAGAACAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCATAGAGATGCTACCCAAGAGAGGCAGGCCCAAACTGGTAGGTTGGGTCGTGGTCTGGGCAATAATCCAGTAAGAAGAAACCCCATGGATTTTGGTCCAAGAGGGGCATCTATGTTACCTTCACCTGTTGCCCAAATGGGTGGAGTACGAGGGTTGCCTACTCAAATTCGCGGATATGGTCCACAGGATGTTCGTATGGATGATAGGCATGAGACAAGAATCCTATCAGTTCCACTGAGTCAAAGACTTGGTGATGATTCAATTACCTTGGGACCCCAAGGGGGTCTTGCTAGAGGAATGTCCATAAGAGGCTCAACCGCAGTTTCAAGTTCAGGAAGTCTTAATGGTTATAGTAATTTGCCAGAGGGCTCAGCATACAGTTCTAGGGAGGACCATGCTCCAAGATATATTCCAGATAGATTTGGTGCTCCGACCGCGTATGATCAACCCAGTGCTAAAGAGAGAAATATGACTTATGGTAACAGTGACATGAGAAATGCAGATAGGAATTTTGACAGACCTGTTCTAACTTCACCTTCCTCTCAACTGCAAGGGACAGTGGTCTCCCAGAATCCTTCTTCAGAAAGGATTTGGCCAGAAGAACGATTACGAGACATGTCAATGGCTGCAATAAGAGAATATTATAGTGCTAGGGATGAGAAGGAAGTTGTTTTGTGTGTTAAAGATTTGAACAATCCAAGCTTCCATCCTTCCATGGTCTCGATTTGGGTCACAGACTCTTTCGAGAGAAAGAACACAGAGAGAGATCTTCTGGCTCAGCTACTAGTCAACCTTGTGAAGTCTCAGGATGGTACCTTGAGTCCAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTTAGTACTTTGGAAGATGCGGTTAACGATGCTCCAAAAGCACCGGAGTTTCTTGGCCGCATGTTTGCCAAAGCTATAACAGAGCATGTAGTCTCTTTGAATGAGATTGGGCAGTTAATACATGAGGGTGGAGAGGAACCTGGCAGTCTCTTAGAAGCGGGACTCGCAGCTGATGTTCTTGGAAGCACCTTGGAGGCCATACAAATGGAGAAAGGCGATACAGTTTTAAGTGAGATCCGGACAAGCTCAAATTTGCGGTTGGAGACTTTCCGGCCGCCGGAACCTTTGAAATCAAGGAAGTTAGAGAACTTTATTTAG 5403 0.4427 MSFNQSKSDKSDAVYRKSGRSASFNQQRGSSGGAYGRGGSGGGAAPSPSLSSSRSFNKKSNNAQGGQSRVNPTVASSTESNSINANRTIPNGSHVQPQFHGGSDAPVTNATIKSPESNAQRSTRAIPKAPTSQPPTLSSDSAPPTTPAKGDASKAFPFQFGSISPGFINGMAIPARTSSAPPNLDEQKRDQARHDSFKPPAPAPAPAPAPAPAPPVPKQHSVRKDIGNNDQSNAGTRAKKDMQLSSLPPGSQMQKPSVVPLSGISMAMPYHQPQASVQFGSPNPQIQSQGMPTAPLQMPLPMPLPIGNAPQVQQQVFVPGLQPHQMHQGLMHQSQNMSFTPQLSPQLPHQLGSMGISIGPQYSPQQGGKFAPRKTTPVKITHPETHEELRLDKRADTYSDGGSSGAKSHASVPSQSQPAQPFTVSHPITYYQPNSYSASSGFYPPASSLPLTSSQITPNSQPPRFSYAVSHGQQNVGFMNSSSHNSIPVNKVGTHIPAITEPPAPEFSHNVLNAISPSSGATSMSIKDSSGTGLVDSSVANSNISGARRSHSARSSVASGDANSSLPQKGSEICSEVSLEQSKLSSDSSVLNSLPKQSSASTEVTAAPLKSSSAVSAESVSVVSNDEEKGKEFLSRSNSLKDNQKVQKKGQLQHQVAVQSPTVADVPSQAVERSSVISETVGTKTNHSAAVTSEDVAAATAADEDMLLTPSVSMSHAEVKSNGTTELSVCVSAEGPVAQTGYSLNNNDELDEFLQEDKLSKDKVSEMGEKTEISSIQGSKQEHDESTSCVPECERTSDSLVMSTCSALGSPRDVSLSRDDIAVSSGAVSASSGTLDQHSADVPETTSKHLKDSLEIAESVVSLPAPGTKDRPILEQNKVKTTKGKKKRREILQKADAAGSTSDLYNAYKGPEEKKDAVVSAEKEDSVSTSGSLEQFSTGAAQRDCITSEHKAELDDWEDAADMSAPKLEVSDQTEQVTDSCIVTMKRYSRDFLLKFAEQCTNLPEGFEITADIAESLMGANVSSSRDPHPSPGRIIDRTGGMSRIDRRGGAITEEDKWSKVSNAFHSGMRLDGIGGNAGFRPVQGGNFGVLRNPRSPLPYAGAGGILSGPMQSMGNLGGMPRNSSDSDRWQRASSFQQRGLIPSPQSPLQMMHKADKKYEVGKVTDAEEAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLAADLPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEADKADEGEIKLSNEEREEKRTKARRRMLGNIRLIGELYKKRMLTERIMHECIRKLLGQHQDPDEEDIEALCKLMSTIGEMIDHPKAKEHIDVYFERMKSLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDATQERQAQTGRLGRGLGNNPVRRNPMDFGPRGASMLPSPVAQMGGVRGLPTQIRGYGPQDVRMDDRHETRILSVPLSQRLGDDSITLGPQGGLARGMSIRGSTAVSSSGSLNGYSNLPEGSAYSSREDHAPRYIPDRFGAPTAYDQPSAKERNMTYGNSDMRNADRNFDRPVLTSPSSQLQGTVVSQNPSSERIWPEERLRDMSMAAIREYYSARDEKEVVLCVKDLNNPSFHPSMVSIWVTDSFERKNTERDLLAQLLVNLVKSQDGTLSPAQLIKGFESVLSTLEDAVNDAPKAPEFLGRMFAKAITEHVVSLNEIGQLIHEGGEEPGSLLEAGLAADVLGSTLEAIQMEKGDTVLSEIRTSSNLRLETFRPPEPLKSRKLENFI* 1801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2527 1800 MobiDBLite consensus disorder prediction 18 33 - -
Amo06g2527 1800 SUPERFAMILY ARM repeat 1608 1790 IPR016024 -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 401 421 - -
Amo06g2527 1800 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 69 1790 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 908 922 - -
Amo06g2527 1800 ProSiteProfiles MI domain profile. 1612 1736 IPR003891 -
Amo06g2527 1800 SUPERFAMILY ARM repeat 1167 1396 IPR016024 -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 379 397 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 902 935 - -
Amo06g2527 1800 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 69 1790 IPR045208 GO:0003743
Amo06g2527 1800 Coils Coil 1254 1274 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 1020 1044 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 1263 1291 - -
Amo06g2527 1800 Gene3D - 1608 1800 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 1515 1570 - -
Amo06g2527 1800 Pfam MA3 domain 1617 1725 IPR003891 -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 1515 1535 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 624 638 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 544 623 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 45 146 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 226 257 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 544 643 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 760 789 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 1 257 - -
Amo06g2527 1800 Gene3D - 1172 1407 - -
Amo06g2527 1800 SMART ma3_7 1613 1727 IPR003891 -
Amo06g2527 1800 Pfam MIF4G domain 1172 1394 IPR003890 GO:0003723|GO:0005515
Amo06g2527 1800 MobiDBLite consensus disorder prediction 360 421 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 1397 1418 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 199 217 - -
Amo06g2527 1800 MobiDBLite consensus disorder prediction 770 784 - -
Amo06g2527 1800 SMART if4_15 1172 1394 IPR003890 GO:0003723|GO:0005515
Amo06g2527 1800 MobiDBLite consensus disorder prediction 1397 1437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2527 Amo-Chr6 88205434 88214973 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2527 1 1799 Eukaryotic Initiation Factors Gene Family AT3G60240 44.670 0.0 1278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2527 K03260 - gmx:100796636 2394